Glycine soja (wild soybean): 114392249
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Entry
114392249 CDS
T06057
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114392249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114392249
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
114392249
SWR1 complex
114392249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
114392249
NCBI-ProteinID:
XP_028209105
LinkDB
All DBs
Position
2:complement(29476390..29493708)
Genome browser
AA seq
2041 aa
AA seq
DB search
MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDPYKSAENNSAEHHMSIQCKDVHDVINEPK
EADVVEYQSDAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQEELAALRDEMDLPI
EELLKRYAGDKGESVMKESSPEHSEDGGKIVRAGDENGDDLLSVSKIGTSNSSIVSGRRC
DESNGDVATPTNNLSQCENGQSENLKEVPSETANEDFSYDFTDEEEDGDFLLGIEDKDDE
TTLSEEEQLERVDAIDPKDEIALLQKESVMPVEELLARYKRDPSDDEDGEYESDYASALS
ENNSDSPVHEDAGQKDPAIPMDEDIKSGEHLAAIQSQEEQWESPHENLEKRESEDIIADA
AAAARSAQPTGNTFSTTSVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRLNGILADEMGL
GKTIMTISLLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKL
KRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNS
KRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEGEEKVNKEVVD
RLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSETQATLASANF
FGMISIIMQLRKVCNHPDLFEGRPIVSSFDMRGIDIQLSSSVCSMLLPSPFSTVDLRGLG
LLFTHLDYSMAAWESDEVQTIETPVTLIMERTDMAELEVIRPHKCQKKLQGTNIFEEIQW
AIWEERLKQTKEHAAAIAWWNSLRCKKRPIYSTTLRDLVALRHPVNDIHQVKANPVSYLY
SSKLADIVLSPVERFQKMTDVVESFMFAIPAARAPSPVCWCSTSETSVFLHPSYKQKCSE
VLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKML
DILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADT
VIFYDSDWNPAMDQQAQDRCHRIGQTREVRIYRLISESTIEENILKKANQKRALDNLVIQ
SGGYNTEFFKKLDPMELFSGHRTLSIKNMPKEKNQNNGEVSVTNADVEAALKCVEDEADY
MALKKVELEEAVDNQEFTEEVIGRFEDDEYVNEDDETAELGESVLNLNKENALMLNGSDH
KEDRPPHSVAGKEDDPDMLAEVKQMAAAAAAAGQAISAFENELRPIDRYAIRFMELWDPI
IDKTALESEVRIEDTEWELDRIEKYKEEMEAEIDEDEEPLVYESWDADYATTAYRQHVEA
LAQHQLMEELEYEARQKEAEETCDSKKTQTPGDSKPKSKKKPKKAKFKSLKKGSLTSGLR
PVKEESQAEPMNIDDEDVTGVDFLSPNSTKQKKRKKSKLTTDGEEEKRLKKSKKSKRDPP
DIYASDLESNSLVVQDEHAESKTCESLVDLEQKTASRSKIGGKISITPMPVKRVWMIKPE
KLKKGHHWSKDCIPPADFWLPQEDAILCAVVHEYGPNWSLVSETLYGMSGGGSYRGRYRH
PVHCCERFGELFQKYVLLSLDNANHEKINSPGSGKALLKVTEDNIRMLLDVASEQVNREL
LLQKHFFALLSSVWKVASHVDRRRNPLPTCNGLYFDQSFYTSIGQPSQNSLKKSSKRMTF
TNLAQSKKLVAAALDDITTRQVNDKVILSNQGEDMPVSADQLDITLEFTKEDSDVLSSFP
SVINLSIIGTEPTPSLNKQTGEDDLKVGLFIAENRFREAARVCEEDSSGWASSAFPTNDA
RSRAGSRIQSSGKQKSSMSDSSKPSRSKSKKASMDPSEMHHHQADSKFQSMPSLKDLRID
LTSLTTDEVGIDSMGSIFSFDLNGESSLEMESVGMIPHDYVAGLISDLDDCTAFPEYTDI
R
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaaggtcccaggtcgaggattgatcacgagagcagagccaaacgccagaag
gctcttgaagctccaagggagcctcggcgacccaaaactcattgggaccatgtcttagaa
gagatggtctggttatcaaaggattttgagtcagagaggaaatggaaattagctcaggca
aaaaaagtagctttaagagccagcaaaggcatgttagatcaggctacaagaggtgaaaag
aagatgaaggaagaggagcagcggttaagaaaggttgcacttaatatttctaaggatgtt
aagaaattctggacaaaaatagaaaaactggttctttacaaacatcaaatggaactcgat
gagaagaagaaaaaggcacttgacaaacagcttgagtttctattagggcaaaccgagagg
tactcaacaatgttggctgaaaatcttgtagatccttataaatcagcagagaataattct
gcagagcaccacatgagtattcaatgcaaagatgtacatgatgttattaatgaacctaag
gaagctgatgttgtagagtatcaatcagatgcagctgacaatgatgaagaatatgatgta
caatatgatgatgaatcggaggatgatgagcgaacaattgagcaagatgaggctcttata
actaaagaagaaaggcaagaggaattggccgctttgcgtgatgaaatggatcttccaatt
gaggagttacttaaacgttatgctggggataaaggagaatctgtaatgaaagaaagtagt
ccagagcatagtgaagatggtgggaaaatagttagagctggtgatgaaaacggagatgat
cttttatctgtaagcaaaattggcacaagcaactccagcatagtctctggtcgacgttgt
gatgaaagtaatggtgatgttgctacaccaacaaacaatttatctcaatgtgagaatggt
caatctgaaaatctaaaagaggttcccagtgagacagcgaatgaagatttttcatatgat
tttactgatgaagaggaagatggtgactttttgcttggcatagaagataaggatgatgaa
acaaccttatctgaggaggaacaactggaaagagttgatgcaattgatcccaaggacgag
attgcattgttacaaaaggagagtgtcatgcctgttgaggaattgcttgcaagatataaa
agggacccaagtgacgatgaagatggggaatatgaatctgattatgcttctgctttatca
gagaacaattcggattctccagtccatgaggatgctgggcagaaggatcctgccattcct
atggatgaagatatcaagtctggtgagcacctggctgccatacagtcccaggaagaacag
tgggaatcacctcatgaaaatttagaaaaaagagaaagtgaggatataattgctgatgca
gcagctgctgcaagatcagcacaacccactggaaacaccttctccacaactagtgtgcgt
acaaagttcccttttcttctcaagtactctcttcgtgagtatcaacatattggattggat
tggcttgtcacgatgtatgaaaaaagactgaatggaattttggcagatgaaatggggctt
ggaaaaacaattatgactatttctttgcttgcacatcttgcttgtgataaagggatttgg
ggcccacatttaattgttgtaccaactagtgtaatgcttaactgggagactgaatttctg
aaatggtgtcctgcctttaaaattttgacttattttggaagtgcaaaggagcgaaaactt
aaaaggcaaggatggttaaaacctaactcctttcatgtatgcataacaacttatagatta
gttattcaggactccaaagttttcaagcgcaaaaagtggaaatacttgatcttagatgaa
gctcatctcattaaaaactggaagtcacaaaggtggcagacactcttgaatttcaattca
aaacgacggattctcttgactggtacgccactacagaatgatctcatggaactgtggtct
ctcatgcatttcttaatgccccatgttttccagtcgcatcaagagtttaaggattggttt
agtaatcctatatcagggatggtagagggtgaagaaaaagttaataaggaggttgttgat
cgccttcataatgtacttcgtccattcttacttcgtcgacttaagcgagatgtggagaag
caacttccaatgaagcatgaacatgtcatatattgtagactatcaaagaggcagcggaat
ctgtatgaagatttcattgctagttcagagacccaagccacacttgcaagtgccaatttt
tttgggatgattagtattatcatgcaacttcgtaaggtttgcaatcatcctgatctattt
gagggtcgtcctattgtcagttcttttgatatgcgtggtattgatattcagttaagttct
tctgtttgctccatgcttttgcctagtcccttttcaacggtggacctaagaggtttgggt
cttttattcactcatcttgactatagcatggctgcttgggaaagtgatgaagtacaaact
attgagacccctgtgactttaatcatggaacgtactgatatggccgaactagaagtaatt
aggccacataaatgtcaaaaaaagttgcaaggaacaaacatttttgaagagatccaatgg
gcgatctgggaagagaggctaaaacagacgaaggaacatgcagcagctattgcatggtgg
aactccttgagatgtaaaaaaagacccatctactcgacaactctaagggatcttgttgcc
ttaagacatcctgtaaatgatattcatcaggtgaaagcaaaccctgtttcatacttgtac
tcatcaaagctagctgacattgttctctccccggttgaacgatttcagaagatgactgat
gtggttgaaagcttcatgtttgcaattccagctgcacgggcaccctctcctgtatgttgg
tgcagtacaagtgagactagtgtgtttctgcacccatcttacaagcagaaatgctctgaa
gttctgttaccgctgctgtcaccaatcaggcctgcaattgtccgccggcaagtgtatttc
cctgacaggcgtcttatacaatttgactgtgggaaactgcaagaactagcaattttgttg
aggagattaaaatcagaaggtcaccgagctttgatattcacccagatgacaaagatgctt
gacatattagaggcattcattaatttgtatgggtatacatacatgcgcttagatggatca
acccaaccggaggagagacagaccttaatgcagcgctttaacaccaaccccaaatatttt
cttttcatcttgtcaactcgtagtgggggtgttggtatcaatttagttggagctgacaca
gttattttttatgatagtgactggaatcctgctatggatcaacaggcacaagatcggtgc
cacagaattggtcagacacgcgaagttcgtatctatagattgattagtgaaagcaccatt
gaggagaatattttgaaaaaagcaaatcagaagcgtgcacttgataatctagttatacaa
agtgggggttataatactgagttcttcaagaagcttgatcctatggaactattttcaggt
catagaacactttcaataaaaaatatgccgaaggagaaaaaccagaacaatggggaagtt
tctgtaactaatgcagatgttgaggctgcattaaaatgtgtagaagatgaagcagattat
atggctttgaagaaagttgaactggaagaggctgtggacaatcaggagtttacagaagaa
gtcattgggagatttgaagacgatgaatatgtaaatgaggatgatgagactgcagaatta
ggtgaatctgttttgaatttaaataaagagaatgcgttaatgttaaatggaagtgatcat
aaggaagatagaccgccacactctgttgctggcaaagaagatgatcctgacatgctggct
gaagtcaaacagatggctgcagctgcagctgcagctggacaagctatctcagcatttgag
aatgagctacgccctattgatcgatatgccattcgttttatggaactgtgggatccaatt
atagataaaacagccttggaatctgaagtcaggattgaggacacagaatgggagttggat
cgcattgaaaagtacaaggaggagatggaagccgaaattgatgaagatgaggaacctctt
gtatatgaaagctgggatgctgattatgcaactacggcatatcgacagcatgtagaggcc
ttggctcaacatcagttaatggaggaactcgaatatgaagctagacagaaagaagccgag
gaaacttgtgattctaaaaagactcaaacaccaggggattcgaagcccaaatctaaaaag
aaacccaagaaggcaaagttcaaatctctaaagaaaggatctttaacctctggcttgaga
cctgtcaaagaagagtcacaagcagagcctatgaacatagatgatgaggatgtcactggt
gtagattttctgtctccaaattcaaccaagcagaaaaaacgtaagaagtctaaattaact
actgatggtgaagaagaaaagagacttaagaagtctaaaaagtccaagagggatcctcct
gacatttatgcttccgatttagaatccaactcattagttgtgcaggatgaacatgcagaa
tcaaagacttgtgaaagtctggttgatttagaacagaaaacagcaagcaggagtaagata
ggaggaaaaatatccatcactcctatgcctgtaaaacgggtctggatgataaaaccggaa
aaattgaaaaagggacatcattggtccaaagattgtattccaccagctgatttttggctg
cctcaggaggatgcaatattatgtgctgttgttcatgaatatggtcctaactggagtttg
gttagtgaaacgctttatggcatgagtggtggtgggtcatacaggggaagatatcgtcat
cctgtccattgctgtgagaggttcggagaactattccaaaagtatgtcttgctgtcactg
gacaatgcaaatcatgagaagatcaacagtccaggctctggaaaggctcttcttaaagtt
acagaggataacattcggatgctgttagatgttgcttctgagcaggtaaatagggagtta
ctgctgcagaagcatttttttgcattgctttcatctgtctggaaggtggcatcacatgtt
gaccgcaggcgaaatccattacccacctgcaatggtctctatttcgatcagagtttctat
acttccattggccagccttcacaaaattccttgaagaaatcctctaaaaggatgacattt
acaaatttagcccagagcaagaagttagtagcagctgcacttgatgatatcacaactagg
caagtgaatgacaaagtcattctctctaaccaaggtgaagacatgccagtaagtgcagat
cagctggatataacactggagttcacaaaagaggatagcgacgtcctatcttcatttcca
tctgttataaatttatcaataattgggactgaaccaacaccatctttaaataagcaaaca
ggagaagatgatcttaaagttggtttgttcattgctgagaatcgtttcagggaggcagca
agagtttgtgaagaagacagctctggatgggcatcatctgcattcccaaccaacgatgca
aggtctcgagctggatccaggatacaatcctccggaaagcagaagtcttccatgtccgac
tcttctaagccttctaggtcaaagtccaaaaaagcttcaatggatcctagtgaaatgcat
caccatcaggctgattctaaattccagtcaatgccatcactcaaagatctgagaattgat
ctcacttcattaactactgatgaagttggaattgatagtatgggtagcattttctccttt
gacttgaatggggaaagttcattggaaatggagagtgttggaatgatcccacatgattat
gttgctggtttaatctcagaccttgatgattgtacagcattccctgaatatactgacatt
agataa
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