Glycine soja (wild soybean): 114392629
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Entry
114392629 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114392629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114392629
03036 Chromosome and associated proteins [BR:
gsj03036
]
114392629
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114392629
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114392629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
114392629
NCBI-ProteinID:
XP_028209633
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All DBs
Position
17:29036862..29054426
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AA seq
698 aa
AA seq
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MPSDTVGNVALVPFTGDSPPAVYPLHHGLAPPISRLSISWARGSSLRLSLFAGAAAKVVE
VKLAGEDSEIPDAHWRRIAYGSVAPFALLQSRRSSLSALLKTPSPYRSDWWEHVLQYSKE
IGSLLGGPKLPASPIIEDPNVIAKRGEEPTSLKAAWELIEIFYVDKQSQAWLPERLVDWL
ADYASLFTSTHETIHGKLVDFQKELVNIQVIEEDPRYWDLLSSALSVGWLDIVVKMLRLH
GSYQLDQLSNRELENGLVEAVAVLISKMPRMRPESVGKLGECYKSKPDFIKAWEKWRSQI
TKLDCSRFWIQCDNQQTREGLRNLLQIMLGNTESLCMATCYWIELYISHFLYIRPFTMGI
ESMYNLAQKCIQLKPRSSTHRLSVLMIGILEENTEVVLAECSREFGPWLVAHAIELLTAG
SEQAEILLHEERYNLGGISIVELHRLVYAQILSSHALTWQIAPIYLTSCMKQGMGLLENL
LYRQSAQHNDVLLKNIEICRLYELDHISSNIMKIAGVHHWKHGHKGAGVFWLQQAQDASC
LDKIAQQLFDSVGKSISDESFKQWEGMIELLGSESKPAGGLEFLHKYRDFKKSLQKVSSG
KSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLKLLNWQDCPLLSVSETNLLLNKLHE
LSLAKLRPHHTEPSLPPDALSSIRLALATNLGQAILDE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggacaccgtcggcaacgtggctctggtccccttcaccggagactcgccgcca
gcggtataccctctccaccacggcctcgctcctccgattagtcgtctctccatctcctgg
gcccgcggcagctccctccgcctctcccttttcgccggcgccgccgccaaggtcgttgaa
gtgaagctcgccggcgaagattcggagatccctgacgctcactggcgccgaatcgcgtac
ggctccgttgcgccgtttgcgctgcttcagagtcggaggagctccctttctgctctcttg
aagactccttctccctatcgttcggattggtgggagcatgtgcttcagtatagcaaagag
ataggttcacttcttggggggccaaagttgcctgctagtcctataattgaggacccaaat
gtaattgctaagagaggtgaagagcctacatctttgaaagctgcgtgggagttaattgaa
atattttatgtggacaagcaatctcaagcatggctacctgaaaggcttgttgattggtta
gctgattatgccagcctctttactagtacacatgaaacaattcatggcaagcttgtggat
tttcagaaagaactagttaacatacaggtgattgaggaggatcccagatattgggacttg
ttgtcatctgcactgtcagttggttggcttgatattgtggtgaaaatgctgcggttgcat
ggatcttaccaattagatcagctcagtaatcgggagttggaaaatggacttgtagaggct
gttgctgttcttatttccaaaatgccccgcatgcgtcctgaatctgttggaaagttaggt
gaatgctataaatccaaacctgacttcatcaaggcctgggaaaaatggaggtcacaaatt
acaaaactggattgcagtcgattctggattcaatgtgataatcaacaaactcgtgagggc
ttgagaaacttgctacaaattatgctgggtaacactgagagtctctgcatggctacatgt
tattggattgaattatatatttctcatttcctgtacataaggccatttacaatgggaata
gaaagcatgtataatttggcccagaaatgcatccagttgaaaccacgatctagtacccat
aggttgtcagtacttatgattggaattcttgaagaaaataccgaggttgttttagctgag
tgttccagagaatttggcccttggttggtggcacatgccatagaactgttgactgcaggg
agtgagcaagcagagattcttctgcatgaggagcgttataacttggggggaatcagcata
gtggaactacatcggcttgtatatgctcaaattctatcgtcacatgcattgacctggcaa
attgctcctatatatttaacatcatgcatgaagcaaggaatgggcttgttagagaattta
ttgtacaggcaatctgctcaacataatgatgtgttgcttaagaacattgagatatgccgt
ttgtatgagcttgatcatattagttcaaatatcatgaagattgctggagtacatcactgg
aagcatggccataagggtgctggagtattctggcttcaacaagcccaagacgcaagttgt
cttgataagattgcccaacagttatttgattctgttggaaagtctatatctgatgaaagc
ttcaagcaatgggaaggcatgattgaactattgggttctgaatctaagcctgctggggga
cttgaatttttgcacaagtatagggatttcaagaaatcccttcagaaggtatctagtgga
aaatcaactgatgcagcaaggcaagctgtaggctccctcatactgcttatgaaaaatcca
tctactcctcagcgcttttggttgcctcttctgtatgactcgttgaagttacttaattgg
caggattgccctcttctaagtgtctctgagaccaatcttctgctgaacaaacttcatgag
ttatctctggcgaagctgcgaccgcaccatactgagcctagcttacctcctgatgcacta
agctctattaggttggctctagctacaaatcttggtcaagccatacttgatgaatag
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