Glycine soja (wild soybean): 114392968
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Entry
114392968 CDS
T06057
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114392968
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
Other 90S particles
114392968
Pre-60S particles
Other pre-60S particles
114392968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
114392968
NCBI-ProteinID:
XP_028210030
LinkDB
All DBs
Position
2:34498646..34525892
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AA seq
1156 aa
AA seq
DB search
MEDEHTEPFKDGADLCQQLMDRYANSAAPQHRHLLATAAALRSNLAVERLPLTPPAYFAA
AISALDAAEAALDPVALSALVSFMAIALPLVPPGGIAALKSHEAAAILIVALAREGEGVG
VACVRAMVKCLGVLIGFCDLEDWDGIRLGFETLLKFSICKRPKVRRCAQESVEKVFKSIK
SSTVTKEASKFVLSELKSCSALALKLNALSTSDECKEDKVLKHEHLEVLHLLNLINLIAP
YLSAEVILKVLSEVRKLFSFKFSELARHALKTIKAIFEALRIQNIVLETEDIVVSLASFV
SLGDRNPLDTVIFAAKLLGVAMDLLYNGQSNLWIKNLPPVCRSVMGLLAFEGNTASQASS
ILNDVLKHHVGSLSLLMGTDQTFHDNCQETVEANAIKATCAVFENALSASDGIPNDHVLS
VISVLFLELGEFSFVLMRNIVLKLADLMTQISGGKVHNEHLEKCIGSAVYAMGIERFLTL
VPISLNEHSYTYSNIWLVPILKQYVTGASLAYYMEHIMSLAKSFKKASQKVKKPGISQDL
LACAYELWGLLPSFCRHATDTHQHFTRLSDVLVTFLKKDPSMHQNVSTALQILVNENKAA
LIPKKSMEDCHAEYDFLSEFGMQPTYSKKAATKNIKSLVSCSNQLLYVLSDLFISSLPET
RFCLKGAIGCLASVTDSSVTKEVFVSLLKSFQFVDCEGEGEILTSPAGVVDSDQNDLKGY
SQRCLILELAYCLVQGAKDNLIEIIYNFTIHSFQATDESVHHEAYNTLCKILEENPCLSS
ARYIELIDLLHGLKPPTSIASLRSRYACFHMLMVHAVKVSLEEEENSKAFLILNEIILTL
KDGKDETRKEAYDYLLNISSTLRDSSFIGSIEPYHKLVSMIMGYLSGSSPHIKSGAVSAL
SVLLYKDTNLPISVSDLVPSLLSLLQTKDVEIIKAVLGFVKVMVSSLEARELQNILSEVI
TEILPWSSVSRNHFKSKVTVIFEILLRKCGSAAVKLVTPEKYKVFLKTVLENRHGKSSEA
VTNDTKNMPEDSSAKRPERRKPENSDNLEKNSLKDNKRKRDKKFETDMPGQKGSLMSTSN
DGLRLPKRSRYSNDKNPNVGRPEESEKGKKSWNKSFTGGGGKRKVKVTSTGKDKAASHVP
IQPSKSHKLQRKFKRN
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaacacacagagccattcaaggacggtgcggacctctgccagcagctcatg
gaccgctacgccaactccgccgcgccgcagcaccgccacctcctcgccaccgccgccgcc
cttcgctccaacctagccgtggagcgcctccccctcacgccgcctgcctacttcgccgcc
gccatctccgcccttgacgcagcagaggcggcgctggatcccgttgcgctctccgctctc
gtgtccttcatggccatcgccctccccctcgtcccgcccggcggcatcgctgcgctgaag
tcccacgaggcggccgcgatcctcatcgtggcactggccagggagggggagggagtcggc
gtggcgtgcgtgagggccatggtgaagtgtttgggggttttgattgggttttgtgacttg
gaggattgggatggaattagattaggttttgaaaccttgctcaagttctccatttgcaag
cgccccaaggtacgcagatgtgctcaagaatctgttgagaaggttttcaagtctatcaaa
tcctccacagttaccaaggaagctagcaagtttgttttgtctgagctgaaaagttgcagt
gctttggcactgaaattaaatgctttgagcacttctgatgaatgtaaagaagataaggtt
ttgaaacatgaacacctggaggtcctacatttactgaatttaattaatctgattgctcca
tatctttctgcagaagtcattctgaaagttctttcagaagtgcgtaaattatttagtttt
aagttttcagaacttgcaaggcatgctcttaaaactattaaagctatttttgaagctttg
agaatccaaaatatagtgctagagacagaggacattgtagtctctcttgcttcatttgta
tctttgggagataggaaccccttggatactgtgatttttgcagcaaaattattaggagtt
gcaatggacttactttataacggacagtcaaacttgtggatcaagaatctccctccagtt
tgtagatctgtgatgggtcttctagcttttgaaggaaacactgcatcacaagcttcaagt
attttgaatgatgtgctcaagcatcatgttggttccttaagcttgttaatgggcacagat
caaacatttcatgataattgtcaggaaactgtggaagctaatgcaataaaagcaacatgt
gcagtttttgagaatgccctttctgcctctgatggaattccaaatgatcatgttttgtca
gtcatatctgttttatttcttgagcttggagaattctcatttgtgttgatgaggaatatt
gtgcttaaacttgctgacttgatgactcaaatttctggaggcaaggttcataatgagcat
cttgagaaatgcattgggtctgctgtttatgctatggggatagagagatttcttacactt
gtacctatatctcttaatgaacacagctatacttactcaaatatttggcttgtacctatc
ttgaagcaatatgttactggtgcatcacttgcatactacatggagcatatcatgtctctt
gccaagtcctttaagaaggctagtcaaaaagtcaaaaagccagggattagtcaggatttg
ctggcttgtgcttatgaactgtggggattgctacctagcttttgtcgtcatgcaactgat
actcaccaacattttactcgtctctctgatgtccttgttacttttctcaaaaaggatcct
tctatgcatcaaaatgtttccacggcattacagattcttgtgaatgaaaacaaagctgca
cttatccctaaaaagagtatggaagattgccatgctgaatatgattttttgtcagagttt
ggcatgcaacctacttattcaaagaaagctgctaccaaaaacataaagtctttggtgtct
tgttcgaatcagttgctttatgttttgtcagatttatttatcagttcacttcctgaaaca
cgcttttgtttaaagggtgcaattgggtgccttgcttctgtcactgattcttctgtaacc
aaagaggtttttgtgtctctgcttaagagttttcaatttgtagattgtgaaggtgaaggt
gaaatattgacaagtccagctggagtggtagatagtgatcaaaatgacttgaagggatat
tctcagaggtgtctgatattggaattagcatattgtcttgttcaaggagcaaaggataat
cttattgagataatttacaatttcactatacattcatttcaggcaactgatgagagtgtt
catcacgaagcatacaacactctgtgcaaaattttagaggagaatccatgcttatcttct
gctcggtacatcgagctaattgatttattacatggcttaaaacctccaacctctattgca
tctcttaggagtcgatatgcttgtttccacatgctgatggtgcatgcagtgaaggttagt
ttagaagaagaggagaactcaaaggcttttcttattcttaatgaaatcattctcacatta
aaagatggaaaggatgaaaccaggaaggaagcatatgattacctcttaaatataagttct
accttgagagactcatcattcattggttctattgaaccgtatcacaaactagttagcatg
ataatgggatatctttctggttcatctccccatataaaaagcggagcagtgtctgcgctg
tctgtattgttatacaaggatacaaatcttcctatctccgtttctgatcttgtcccttct
cttttatctttgctgcaaacaaaagatgtggaaatcataaaagctgtcttgggttttgtt
aaagtgatggtatctagcttagaagcaagagaactgcagaatattctctcagaagttatt
actgaaatcctcccctggtcatctgtttcaagaaatcattttaaatcaaaggtcactgtt
atatttgaaatattattacggaagtgtggttctgctgctgtcaaactggttaccccagag
aaatataaggtttttctcaagacagttctagagaatcgacatggcaaatcaagtgaagca
gtcactaatgatacaaaaaatatgcctgaagattcatctgccaagagaccagagcggagg
aagcctgaaaattcagataacctagagaaaaattcacttaaggacaacaagagaaagagg
gacaagaaatttgagacagacatgcctggccaaaaggggtcacttatgtctactagtaat
gatggattaagattacccaagagaagtaggtattctaacgataaaaatcctaatgtagga
aggccagaagaaagtgaaaaaggcaagaaaagttggaacaagagtttcactggtggtggt
gggaagagaaaggtgaaggtaacaagtacaggaaaggataaagcagcttctcatgtacct
atacaaccttccaagtctcacaagctgcaaaggaaattcaaaagaaattga
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