Glycine soja (wild soybean): 114393270
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Entry
114393270 CDS
T06057
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114393270
Transcription machinery [BR:
gsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114393270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
MapZ_C2
Motif
Other DBs
NCBI-GeneID:
114393270
NCBI-ProteinID:
XP_028210345
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Position
17:complement(27782684..27790653)
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AA seq
551 aa
AA seq
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MGLGFGFGLNPRLRYCLLLHTPHSFTNSPLCLSPSSAGVRETCFNFTRLSFPSTFYEEGE
ALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSLSSVHKMIDNTQMPFGEVSTVS
KKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAIILQLGKLGALELFNVCLSRSLGT
SLVSNYADKVDDYKDKVVVQSSKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSAS
LVKRAPNTKNKRILVAKREAEMSKGVKVLAELEKMRTAIEEDTKRVASLSTWAEASGVDE
KVLQKLLHRGYYCQDELIRSTRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDST
RGYKFSTYVQYWIRKSILRVVARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDYE
IAKMTGLSLDKIKSASNCLRIVASIDQKVGDYLGVEYMELLPDATIESPEDAVMKQHMRK
DVHDLLKGLNLRERKILTLRFGLNDNQPRSLQDIGTLFKVSKERIRKIEKKALTKLKNEA
TISKLHYYLDL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcggtttcggcttcgggctaaatcccagactcagatattgtctgcttcttcac
actcctcattccttcaccaattcacctctctgcctttctccatcttctgctggagtcagg
gaaacttgtttcaacttcacgaggttatctttcccctcaacattttatgaggaaggagaa
gctttgcaaaaggattttggaagggtgtttgcattttcatcatcagccttggaaaccttg
gaaaatgattcattaggaagagaagaaacccaggtaaacaaaggaaagaggtcactgagt
agtgtacataaaatgattgataatacccaaatgccttttggagaggtatctactgtttct
aagaagtttgagtcattcagggcacagcattttcgtttgttaatggagaacctatgtgtt
ttagaagaaacttttgttgattctgaagcactgaggttggaaaaggctattatattgcaa
ctaggaaagcttggtgctcttgagttattcaatgtttgtctatcaagatcacttggaacc
tcacttgtgtcaaactatgctgacaaagtggatgactacaaggacaaagttgttgtccag
tctagcaagaaaaaggaaaataaaaccagaagaaagagagaatttgtttccacagcagtg
tcgtcccagtcattgactttaaaagctaatcaggaagatctgttaggtttctcagcttca
cttgtgaaaagagcaccaaatactaaaaataaaaggatactggttgctaaaagggaggca
gagatgtcaaaaggcgtaaaggtgctagcagagttagagaaaatgaggacagctatagaa
gaggataccaagcgagtagcaagcttgagtacctgggcagaagcatctggagttgatgag
aaggtgctacagaagctattgcatcgtggctattattgccaggatgagctcatacgaagt
actcgttccttagttctataccttgcccgaaaatacaggggtatgggaatagctttggat
gatttacttcaggcaggatacgtaggtgttcttcaaggagctgaaagatttgacagtact
aggggctacaaattctcaacctatgtgcagtactggataaggaaatcaattttaagagtg
gtggcacgatatgctcgaggaattgtaattccttggtcgttgaacagggcaataaatcag
atccagaaagctcgaaaagccatgaaaagtacacacaagaaatgcccagatgattacgaa
attgcaaagatgacaggtctttcactggataaaatcaaatcagctagcaattgtctaaga
atagttgcttcaattgatcagaaggtgggggactaccttggtgtagaatatatggaactt
ttgcccgatgcaacaattgagagtcctgaagatgctgtaatgaagcaacatatgagaaaa
gacgtacatgatctcctgaaaggcttgaacttaagggaaaggaaaatattaaccctacgc
tttggccttaatgataaccagcctaggtctcttcaggacatagggacacttttcaaagtt
agcaaagagaggataaggaagatagaaaaaaaagctctaacaaagttaaagaatgaagca
accatctcaaagttacattattatttggatctgtag
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