Glycine soja (wild soybean): 114393338
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Entry
114393338 CDS
T06057
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114393338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114393338
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114393338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Aladin
NBCH_WD40
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_like
Motif
Other DBs
NCBI-GeneID:
114393338
NCBI-ProteinID:
XP_028210442
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All DBs
Position
2:37970305..37975258
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AA seq
570 aa
AA seq
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MEVEKENTTSTITAEPSVSASDGQDPVSSVNASLPDPMQPVIPQVIAPFVVPSLAPIPAI
PPPRPLAPLPVRSPVIRPPVPQNGEVGSSDSDSDNDDSNARINQGGGEYEISEESRLVRE
RQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEAITLFGEREMERRDRLRMIMAKLD
AEGQLEKLMKAHEEEEAVASASKDEAEEELQYPFYTEGSKALLDSRIYIAKYSLARAALR
IQRAQRRRDDPDEDMDAEMDWALKQAGNLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLT
GASKLWSMPKIKKHSIFKGHTERATDVAYSPVHDHLATASADRTAKYWNQGSLLKTFEGH
LDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELLLQEGHSRSVYGLAFHNDGSLAAS
CGLDSLARVWDLRTGRSILALEGHVKPVLSISFSPNVYHLATGGEDNTCRIWDLRKKKSF
YTIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLG
DGGSIVTVSHDRTIKLWSSNPTDEQAMDVD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagagaaggaaaataccacatctactattactgcagaaccctcagtatctgcc
tctgatggtcaagatcctgtttcttctgttaatgcatctctacccgatcctatgcaacct
gttattccacaggttattgcaccttttgttgtaccttctttagctccaattcctgcaatt
cctccgcctcgcccactggcaccgcttccagttcggtcacctgtcattaggccacctgtg
ccacaaaatggcgaggttggatcaagtgactctgattcagacaatgatgattcaaatgca
agaattaaccaagggggtggggagtatgagatatcggaagagagtagactggtgagagag
cggcaggaaaaggcaatgcaggagctcatgatgaagaggcgtgctgctgctcttgctgtt
cctacgaatgatatggccgtgcgagctcgccttcgacatcttggtgaagctataactctg
tttggtgagagggagatggagagacgggacagattgcggatgattatggcgaagctggat
gcagaaggtcagctggagaagctgatgaaagctcatgaggaagaagaggctgtggcttct
gcttcgaaagatgaggctgaggaagaactgcagtatcctttttacactgaagggtcaaag
gctctcctggattccagaatttatattgctaaatattctttggcaagggcagcattacgg
attcaacgtgcacagaggagaagggatgatccagatgaagatatggatgcagagatggat
tgggcattgaagcaggctgggaatttgagtcttgaattcagtgaaattggagatgatcga
ccactttctggttgctccttctcaagggatggaaaatggcttgctacctgttctctgaca
ggagcttccaagttgtggagcatgcccaaaataaaaaagcattccatcttcaagggtcac
acagagcgtgctactgatgttgcttattctcctgttcatgatcatttagcaactgcctct
gctgatcgaacagcaaagtattggaatcaaggatctctactgaagacatttgagggtcat
ctagaccgtcttgcccgcattgccttccatccatcagggaagtacctgggtactgctagc
tttgacaagacatggagattatgggacatagaaacaggagacgagttgcttcttcaagaa
ggccatagtagaagtgtatatggtctggctttccacaatgatggatcattagctgcatct
tgtggactagactctctggctcgtgtttgggacctccgaactggaagaagtattcttgca
ctggaaggtcatgtcaaaccggttctcagcatcagtttttcacccaatgtatatcatcta
gccacgggtggtgaagacaacacttgtcggatttgggatttgaggaagaagaaatccttt
tatactattcctgcccactctaatttaatatcacaagttaaatttgagccacacgaaggt
tactttttggtaactgcctcatatgacatgactgctaaggtttggtcaggccgtgacttt
aagcctgtgaagacactatctgggcatgaagctaaagttacttctgtggatgttcttggt
gatggcgggtctattgttactgtctcacatgatcgcaccataaagctgtggtccagcaat
ccgactgatgaacaagctatggatgttgactaa
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