Glycine soja (wild soybean): 114393435
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Entry
114393435 CDS
T06057
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
114393435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114393435
03029 Mitochondrial biogenesis [BR:
gsj03029
]
114393435
Membrane trafficking [BR:
gsj04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
114393435
Others
Specific organelles associated proteins
Auto phagosome
114393435
Mitochondrial biogenesis [BR:
gsj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114393435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ATG16
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_SPT8
WDR54
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_EIPR1
Ge1_WD40
Cytochrom_D1
eIF2A
PQQ_2
PEP5_VPS11_N
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
INO80E
TolA_bind_tri
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
114393435
NCBI-ProteinID:
XP_028210591
LinkDB
All DBs
Position
17:10075937..10079594
Genome browser
AA seq
514 aa
AA seq
DB search
MAKARKSQEEIASEAIKHALKALRKRHLLEEAAHAPTVLALSRPIVSQGSEWKEKAENLQ
MELQQCYKAQSRLSEQLVVEVAESRASKTSLQEKENALADLQKELTELRDECSQLKVDLE
EKIKSLELVVSENSELKAQLEQMTTKANKAEAENKMLIDRWMLEKMKDAERLNEANTLYE
EMVEKLRASGLEQLARQQVDGIVRRSEEGAEFFFDSNIPSTCKYRLRAHEGGCASMLFEY
NSSKLITGGQDRLVKMWDANTGSLSSTLHGCLGSVLDLTITHDNQSVIAASSSNNLYVWD
VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTIKVWDLVKGYCTNTVIFRSNCN
SLSFSMDGQTIFSGHVDGNLRLWDIQTGKLLSEVAAHSLAVTSLSLSRNGNVVLTSGRDN
LHNLFDVRSLEVCGTLKAMGNRVASNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVS
TLKEHTSSVLCCRWSGIAKPLASADKNGIVCVWT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcacgcaagtcgcaagaagaaattgcgagtgaagccatcaagcatgctttg
aaggctctgcggaagcgccatttgcttgaggaagctgctcatgctcccactgttctagct
ctttctagacccatcgtttctcagggctctgagtggaaagagaaagcagagaatcttcaa
atggaacttcagcaatgctacaaagctcaatctcgcctgtctgagcaacttgttgtggaa
gtagctgagtccagagcttcgaaaacgtctcttcaagagaaagaaaatgcattggctgat
ctgcagaaggagttgactgaattgagggatgagtgctctcaattgaaggtggacttggaa
gaaaaaattaaatctctggaactggttgtcagtgagaattctgaacttaaagcacaactg
gagcagatgactactaaagccaataaagctgaagctgaaaacaagatgttgattgaccgc
tggatgttagaaaagatgaaggatgctgaacgcctaaatgaggccaacacactgtatgaa
gagatggttgagaaactaagggccagtggtttagaacaacttgcaaggcagcaggtggat
ggtatagttcgccgaagtgaagaaggtgctgaattcttttttgattcaaacatcccttcc
acatgtaaatacaggcttcgtgcacatgaaggtggttgtgcttccatgttgtttgagtac
aattccagtaaattgattactgggggacaggatcggttagttaaaatgtgggatgcaaat
acaggatccttaagttctactcttcatggctgccttggctcagtattggatctcacaatc
acccacgataatcaatctgtcattgctgcaagcagctcaaacaacttgtatgtatgggat
gtcaactcaggtcgtgtccgtcatacccttactggccacactgataaagtttgtgctgtt
gatgtcagcaagatttcaagtcgtcatgttgtcagtgctgcctatgatcgtaccataaaa
gtttgggacttagtgaaaggttactgcacaaacacagtaatttttcgcagcaactgcaat
tctctttccttcagcatggatggtcaaaccatattttctgggcatgttgatggtaacctt
cggctatgggacattcaaactggaaagttacttagtgaggttgctgcccattcacttgca
gtcacgtcactatccctttcccgaaatggaaatgttgtactgaccagtggaagggacaat
ttacacaatttgtttgatgtgcgatctctggaagtttgtggcacattaaaagccatggga
aacagagtggcttctaattggagtcgctcctgtatcagcccagatgacaatcatgttgct
gctgggtctgctgatggatctgtctatatttggtcaatatctaaaggtgatatagtcagt
actctgaaggaacacacttcctctgttctgtgttgtaggtggagcggaattgcaaaaccc
ctagcttcagctgataagaatgggattgtttgcgtctggacataa
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