Glycine soja (wild soybean): 114393460
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Entry
114393460 CDS
T06057
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114393460
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114393460
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114393460
Protein phosphatases and associated proteins [BR:
gsj01009
]
HAD phosphatases
Fcp/Scp phosphatases
114393460
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114393460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
114393460
NCBI-ProteinID:
XP_028210618
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All DBs
Position
2:38540893..38546219
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AA seq
716 aa
AA seq
DB search
MAKDKPVSVKDAVFKLQMSLLEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNMCGYPLC
SNALPSDRPRKGRYRISLKEHKVYDLQETYMFCSSNCLVSSKTFAGSLQAERCSGLDLEK
LNNVLSLFENLNLEPVETLQKNGDLGLSDLKIQEKTERSSGEVSLEQWAGPSNAIEGYVP
KPRNRDSKGLRKNVKKGSKTGHGKSISDINLINSEMGFVSTIIMQDEYSVSKVPPGQMDA
TANHQIKPTATVKQPEKVDAEVVRKDDDSIQDLSSSFKSSLILSTSEKEEEVTKSCEAVL
KFSPGCAIQKKDVHSISISERQCDVEQNDSARKSVQVKGKTSRVIANDDASTSNLDPANV
EEKFQVEKAGGSLKTKPRSSLKSAGEKKFSRTVTWADEKINSTGSKDLCEFKEFGDIKKE
SDSVGNNIDVANDEDILRRASAEACAIALSSASEAVASGDSDVSDAVFSPMNETCAVSEA
GITILPPPHDAAEEGTVEDADILQNDSVTLKWPRKTGISEADFFESDDSWFDAPPEGFSL
TLSPFATMWNTLFSWTTSSSLAYIYGRDESFHEEYLSVNGREYPCKVVLADGRSSEIKQT
LASCLARALPALVAVLRLPIPVSIMEQGMACLLETMSFVDALPAFRTKQWQVVALLFIDA
LSVCRLPALISYMTDRRASFHRVLSGSQIRMEEYEVLKDLVVPLGRAPHISSQSGA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggacaagcctgtttctgtcaaagatgccgtcttcaaattgcaaatgtcactc
cttgaaggcattcaaaatgaagaccagctgtttgctgccgggtctttgatgtcaaggagt
gactacgaagacattgtaaccgaacgatccatcacaaacatgtgtggttatccactctgc
agcaatgctttgccatccgatcgcccgcggaagggtagatataggatttcactgaaggag
cacaaggtctatgacctacaagagacttacatgttttgttcttcaaattgtcttgttagc
agcaaaacttttgctgggagcttgcaagctgagagatgctctggtttagacctggagaaa
ctaaacaatgttcttagcttgtttgagaatttgaatctggaaccggtggagactttgcaa
aagaatggagatttaggtttgtctgatttgaaaatccaggagaaaacagaaagaagcagt
ggggaggtgtctttggagcagtgggctggaccttcaaatgcaattgagggatatgtacca
aaaccaagaaaccgtgattctaagggtttgcggaaaaatgttaaaaaagggtccaaaact
ggtcatggcaagtcaattagtgacataaatttaattaacagtgagatgggctttgtgagt
actataattatgcaagatgagtatagtgtttcaaaagtaccgccaggtcaaatggatgca
actgctaatcatcaaattaaaccaacagctacagtcaagcagccagaaaaggttgatgct
gaagtggtcaggaaagatgatgatagcattcaagatttgtcttcatcttttaagagcagt
ttaattttaagcacctcagaaaaagaggaggaagtaactaaatcatgtgaagctgtgctc
aaattctcccccggttgtgctattcaaaagaaagatgttcattcaatctccatatcagaa
agacaatgtgatgtggaacagaatgattctgctaggaaatctgtacaagtcaaagggaaa
acgagtagagttattgctaatgatgatgcttccacttccaatttagatcctgccaatgtt
gaagagaaattccaagtggaaaaagcaggtggatcattaaagactaaacccagatcttcc
cttaaatctgctggtgaaaagaaatttagtcgcactgttacttgggcggatgagaaaatc
aacagcactgggagtaaagatctttgtgagtttaaagaatttggagatattaaaaaagaa
tctgactcagtaggaaataatatagatgttgccaatgatgaagatatattacgtcgtgcg
tcagcagaagcttgtgctattgcattgagctcagcatcagaagcagttgcctctggagac
tcggatgtcagtgatgctgttttctcgcctatgaatgaaacttgtgcagtttctgaagct
ggaatcactatattgccacctccacatgatgctgctgaggaaggtactgtggaggatgct
gatatactacaaaatgattcagttactctgaaatggccaagaaagactggaatttctgaa
gctgatttctttgaatctgatgactcatggtttgatgctccaccagagggtttcagtttg
actttgtcaccttttgcaactatgtggaataccctcttttcatggacaacatcatcttct
ttggcatatatatatgggagggatgaaagttttcatgaagaatatctatcagttaatggc
agagaatatccttgcaaagttgtcttggcagatggtcgctcatctgaaataaaacaaact
ttagccagttgtcttgctcgagctttacctgcgcttgttgctgtgctccggctgccaata
ccagtatctatcatggagcaagggatggcatgcttgctggagacaatgtcatttgtggac
gcacttccagctttcagaacaaaacaatggcaagtggttgctcttttgttcattgatgca
ttgtccgtatgtagattacctgctcttatctcatacatgacggataggagggcttcattt
catagggttttgagtggttctcaaatacgtatggaagagtatgaggttttgaaggatctt
gtagtaccactgggccgagcacctcatatctcttcccaaagtggggcatga
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