Glycine soja (wild soybean): 114393662
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Entry
114393662 CDS
T06057
Name
(RefSeq) long chain base biosynthesis protein 1-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00600
Sphingolipid metabolism
gsj01100
Metabolic pathways
Module
gsj_M00094
Ceramide biosynthesis
gsj_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
114393662
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsj01007
]
114393662
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
114393662
Amino acid related enzymes [BR:
gsj01007
]
Aminotransferase (transaminase)
Class II
114393662
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
114393662
NCBI-ProteinID:
XP_028210841
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Position
17:39883092..39889836
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AA seq
483 aa
AA seq
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MASAVVNFLNATLDWVTFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPP
KRPLTNKEIDELCDEWVPEPLIPSLNKELQYEPPVLESAAGPHTIINGKEVVNFASANYL
GFIGHPKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPESILYSYGLS
TMFSAIPAFSKKGDVIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLENITAKYK
KAKNLRRYIVIEAVYQNSGEIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEYC
GVPVEKIDIITASMGHALATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAITAI
DVLEENPNLIKKLKKNIAFLRKGLSKIPGITITSNPESPIVYLRLEKSRGSMKDDLHLLE
NIAERVLKEESVFVVVSKRSTLDKCRLPVGIRLFVSAGHSESDLLKASESLKKVVASVLG
GQN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccgtcgtgaatttcttgaacgcgacgttggattgggtgacgtttgcgtcg
gatggtccttctgcgcgagctgtagttttcggagtccatatcggtggacatttgtttatc
gaagtgtttttgctagttgtcatacttttcttgctttcacagaaaagttacaagcctcct
aaaaggcctttaacaaataaggaaattgatgagttatgtgacgaatgggttccagaaccc
cttattccttctcttaataaagagttgcagtatgaaccaccagtgctggagagtgctgct
gggccacataccataattaatggcaaagaagttgtcaattttgcttcagcaaactatctt
gggtttataggtcatccaaagctacttgactcatgttcttctgctttagcgaaatacggt
gttggttcttgtggtccccgtggattttatgggacaattgatgtccaccttgactgtgaa
gcaagaatagcaaaatttttaggaacccctgaatcaattctgtactcttatggactttcc
accatgttcagtgcaattcccgctttctctaaaaaaggagatgtaattgtggcggatgag
ggagtccactggggaatacagaatggcctttatctttctagaagcacagtggtgtatttt
aagcacaatgacatggattctttaagagaaactttagagaacattactgccaaatataag
aaggccaagaatttgaggcgttatattgttattgaagctgtctaccagaattctggggaa
atagcacccttggacgagatcattaaattgaaggaaaaatatcgctttcgtgttttgcta
gatgagagcaactcattgggtgtgcttggaagttctggaagaggtctcactgaatactgt
ggagttccagttgagaagatagacattataactgcttctatgggacatgcattagccaca
gaaggaggattctgcactggaagtacaagagttatagatcaccaacgattgagtagctct
ggttatgtcttttctgcttctttgcccccatatcttgcaagtgctgcaattacagctatt
gatgtcctggaggaaaatcccaatctgataaaaaagctgaagaaaaatattgctttttta
agaaaaggattgtcaaaaataccaggcatcacaattacaagtaatccagagtcacctatt
gtttatttgagattagagaaatcaagaggttccatgaaagatgacctgcatctgcttgaa
aatatcgcggaacgggttttgaaagaagaatctgtatttgtggttgtttccaaaagatca
acattggacaaatgccgtttgcctgtgggaattagattgtttgtttctgctgggcattca
gagtctgatctgctcaaggcatctgaatcattgaaaaaggttgtagcatcagtcctgggt
ggtcagaattga
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