Glycine soja (wild soybean): 114393895
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Entry
114393895 CDS
T06057
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114393895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114393895
03036 Chromosome and associated proteins [BR:
gsj03036
]
114393895
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114393895
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114393895
PBAF complex
114393895
GBAF(ncBAF) complex
114393895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Lin-8
TFIIA
Motif
Other DBs
NCBI-GeneID:
114393895
NCBI-ProteinID:
XP_028211177
LinkDB
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Position
17:complement(10398646..10401915)
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AA seq
525 aa
AA seq
DB search
MNNTNNINNINTNPTKNAATPSFFTNPGAPSIPMNHPQPHLLSQTQPQPQGATSHFHGHF
QLSQPQTHVVAQQQHQQQQPHPHPQVHNNANTNAHVAAPTPPKRANQKPPSRPQGSSNAT
QSSAFKTMELTVAPPRKKRSFPGNLIPEKVAKLVPESAIYAKLLELETQIDSALARKKID
VQANVRNPRCVRKTLRVYVYNTFSNQVKVETGKNGVEEPSWALRITGRVLEDGNGKDSVA
EGISTKEYPKFSAFFKKITIYLDQGLYQDNHVVVWDSAHSAAAQQRDGFEVKRKGDKEFT
AVVRMAMNYSPDKFVVSPQLARVLGVEFDSRCRIIAALWHYVKAKKLQSPNDPSFFMCDA
SLQRVFGEEKMKFSVASQKISQHLSHPQPIHLEHKIKLSGNGPAGSTCYDVQVDVPLPLE
KDMSAFLASTERHKDIDTFDELISDSIKKIHEHHRRRAFFLGFSQSPAEFINALIASQSK
DLKLVAGDVSQNTENERRAEFYNQPWVEDAVIRYLTRKNARSDAP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaccaacaacattaacaacatcaacaccaacccaaccaagaatgccgcaaca
ccgtcgtttttcaccaaccccggagcaccctccatccccatgaaccacccacaaccccac
cttctctcacagacgcagcctcaaccacaaggtgccacgtcacactttcacggccacttt
cagctttcacaaccccaaacccacgtcgtcgcacagcaacaacatcaacaacaacaacca
caccctcacccacaagtgcacaacaatgccaacaccaacgcccacgtggcagcacccaca
ccacccaagcgtgcaaatcagaaacccccttcacgccctcaaggctcctccaacgctacc
caatcctctgcgttcaagaccatggaactcaccgttgcgccgccgcggaaaaagagaagc
tttcccggtaacctgattccagaaaaagtggccaagcttgttccagaatccgcaatctac
gccaagttgctcgaactcgagactcagatagattctgctttggccaggaagaaaattgat
gtgcaggcgaatgttagaaaccctcgctgcgttaggaaaacgcttagagtttatgtttat
aacactttttcgaatcaggtgaaagtggagactgggaagaatggtgtggaggagccttct
tgggctctgaggataactggaagggtgttggaagatggtaatggaaaggattctgtggcg
gaaggaatttcgacgaaggaatatccaaaattctcggctttctttaagaagattaccata
tacttggatcagggtttgtaccaggataaccatgttgttgtgtgggatagtgctcattcg
gcggctgcgcagcagcgtgatggttttgaggtgaagaggaaaggagataaggaattcact
gcggtggttaggatggcgatgaattattcgcctgacaagtttgtggtttcaccgcaactg
gctagagttttaggggttgagtttgactcgcgctgcaggatcatagctgctctttggcac
tatgtgaaggctaagaagctgcagagtcccaatgacccttcgttcttcatgtgtgatgct
tctctccagagggtgtttggggaggagaagatgaaattctctgtggcttcgcagaagata
tcgcagcatttgtcacacccgcagcctatacacctggagcataaaataaagctttctgga
aatggtccagccggaagtacttgctatgatgtgcaggttgatgtgcctcttccacttgag
aaggatatgtctgcgttcttggcaagcactgagaggcacaaagatattgatacttttgat
gaattgatctctgattcgataaagaagattcatgaacatcataggagacgggcattcttt
ctcggctttagtcagtccccagcagagtttattaatgccttgatagcttctcagagcaag
gatctgaagctcgttgctggagatgtgagccagaatactgaaaatgaacgacgtgctgaa
ttctacaatcaaccgtgggttgaggatgctgttattcgctacctgacccggaaaaatgct
cgaagtgatgctccttga
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