Glycine soja (wild soybean): 114393970
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Entry
114393970 CDS
T06057
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114393970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114393970
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114393970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
PD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Nup120_160
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
114393970
NCBI-ProteinID:
XP_028211300
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Position
17:4769648..4777920
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AA seq
803 aa
AA seq
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MIRGGQNYVSSAPAFSNDGKRLLVCSGSTVSIFSTGTGSLVSSLEGHTASVTAVVVVPSS
TGLSYCWTASVDGTIRHWDFSVPECVNIIDLCLPIFSMVVPSILSPREENGKTPPNVIAY
VSVQGIKAPPDNPTKPLYGQIRKCNLTHFRSVSNLIMKETERPESLTISPSGNFLGIKDK
RKLHIWAVPKKDSDSAVSKKIILHHTKTLTVLAFHPTERTVAAGDVTGRILIWHEFGAQK
FLSSSGLINGRSTDQENKDGVRQNDDAESSVTRHWHSSGVSCLSFSSDGAFLYSGGKEGV
LVIWRLDTKKNYCLPRFGSPLLYFVDSPDRSLFSISHADNQMLILKKPSKPMEIISCISG
IKPPLSSQDICEGLSSRVAFDCTSGLLAVQTENYAIQFYSLFANREVYEVQVCERNHQPV
DEVTVVVSLVELSVDGSMMGTVDVKLPEDGIGGFICLKFWDLDDNKRFSLSTLIYEPHRD
AHISAVAFHPTRPMAVSTSYGGDFKIWVCKEEIQQNGQMVRNSGWKCHAVGSYKNKAMRA
AAFSADGSVLAVAADTVITLWDPNNNVLIAVIGETPMPITRLVFAGKSDYLLSVCHGSKP
QLSVWSMSKLAASWSYRLQIEAVSSAIDLSYFAVLALLPKSNECTFKGDGIILLFKVTDP
VPVASWSVTKAKGGRLAFIQGDPFERAVIDGKPTQTLLAYINGDHEYVIFHPSGRKACEL
SMTKQDDLAFEETGQFGYASIYGELPKFDLKRKMDSSISSAASASKRPWETIFSGLSQSL
PPLTKLCSEFLESLLEKRTATVE
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcggaggccaaaactacgtttcttccgctccggcgttttcaaacgacggcaag
cgcctcctcgtttgcagcggctccaccgtgtccatcttcagcaccggcaccggctccctc
gtttcctcgctcgaaggccacaccgcctccgtcaccgccgtcgtggtggtcccctcctcc
actggcctaagctactgctggaccgcttctgtcgacggtaccatccgccactgggacttc
tccgttcccgaatgcgtcaatattatcgacctttgcttaccaattttctctatggtggtg
ccttccatattgtctcctcgggaagaaaacgggaagacgccgccgaatgttattgcttac
gtgtctgttcaaggtataaaagcaccaccggacaatcccaccaagcctctttatggacag
atcaggaagtgtaatttgacccactttcgctctgttagcaaccttatcatgaaagagact
gaacggccagaatctttaaccattagtccctcgggtaattttttgggtataaaagacaaa
cggaaacttcatatatgggcagttcctaaaaaggactctgattccgctgtgtccaagaag
attatcctgcatcatacaaagacgttgactgttcttgcattccatccgacagagagaact
gtggctgctggtgatgtaactggaagaattttaatttggcatgaatttggtgctcagaag
ttcttgagcagtagtggattaatcaatggaagatcaacggatcaggaaaataaggatggg
gttaggcaaaatgatgatgctgaatcaagcgtcacacggcattggcactcttctggagtg
agttgtctatctttctcttcagatggagccttcctctactcaggtgggaaggaaggagtt
ctcgtgatttggcggttagacacaaaaaagaattattgcttaccaagatttggatctcca
cttttgtattttgtagattctcctgatcgatcacttttctcaatatctcatgcagataat
caaatgcttatattgaagaagccttcaaagccaatggaaataatcagctgtatttctggt
atcaagccccctttgtcttctcaagatatatgtgaaggtctttccagccgagttgccttt
gactgcacttctggtttattggctgtacaaacagagaattatgccatccaattctacagc
ttgtttgctaatcgcgaagtttatgaggttcaagtctgtgaaagaaaccatcaaccagtt
gatgaggtcacggtggtggtgagcttggtagagctatctgttgatggctctatgatgggt
acagttgatgtcaagcttcctgaagatggaataggaggttttatttgtttgaagttttgg
gatttggatgataacaagagattttcattatctacccttatttatgaaccacacagggat
gctcatatttctgctgttgccttccatcctactcgtcctatggctgtcagcacatcttat
ggtggagatttcaagatatgggtctgcaaggaagaaattcagcaaaatggccagatggtt
cggaattctggttggaagtgtcatgctgttgggtcatacaaaaataaagccatgagagct
gctgctttctcagctgatggttctgtgctggcagttgcagcggacactgttattacattg
tgggatcctaataataatgtcctcattgctgttataggagaaactccaatgcctattacg
agactcgtctttgctggaaagtcagattatcttctgtctgtatgtcatggttcaaaacca
cagctgtctgtttggagtatgtcaaagttagctgcttcttggtcatacagactccaaata
gaagctgtctcctctgcaatagacttgtcatattttgctgtccttgcgctccttcccaaa
tcaaatgaatgtacatttaaaggtgatgggataatcttattattcaaagtgacagatcct
gttccggtggcttcctggtctgtaactaaggccaagggagggaggctggcttttatccaa
ggagatccatttgaacgagcagttattgatgggaaaccaacacagacactgcttgcatat
ataaatggagatcatgaatatgtcatctttcatccatctggcagaaaagcctgtgagctt
agtatgactaagcaggatgatcttgcgtttgaagaaacaggacaatttggatacgcatca
atttatggggagctacccaagtttgatttgaaaaggaaaatggactcatcgatttcatct
gctgcttctgcttccaagaggccttgggaaaccatatttagtggattatcacaatcgttg
ccacccctcactaaattgtgctcggaatttttggagtccctgctggagaaaaggacagca
actgtagaatga
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