KEGG   Glycine soja (wild soybean): 114394040
Entry
114394040         CDS       T06057                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03030  DNA replication
gsj03410  Base excision repair
gsj03420  Nucleotide excision repair
gsj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114394040
   03410 Base excision repair
    114394040
   03420 Nucleotide excision repair
    114394040
   03430 Mismatch repair
    114394040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsj03032]
    114394040
   03036 Chromosome and associated proteins [BR:gsj03036]
    114394040
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114394040
DNA replication proteins [BR:gsj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114394040
  DNA Replication Termination Factors
   ELG1-RFC complex
    114394040
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114394040
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114394040
  Check point factors
   HRAD17(Rad24)-RFC complex
    114394040
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 DUF815 ABC_tran RsgA_GTPase AAA_5 AAA_22 nSTAND3 AAA_16 AAA_29 RuvB_N AAA_24 AAA_23 AAA_33 P-loop_TraG SprT-like ATPase_2 AAA_2 TsaE nSTAND1
Other DBs
NCBI-GeneID: 114394040
NCBI-ProteinID: XP_028211389
LinkDB
Position
17:24241424..24252599
AA seq 354 aa
MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQY
PFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE
LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggacaaatatcgtcccaaaaccctcgaccaggttatggtccacaccgac
atcgctcgcaatctcaagaaattggtaacggaacaggattgcccccatttactcttctat
ggcccatctggctccggcaagaaaaccctaatcatggctcttctccgccaaatgttcgga
cctggtgccgaaaaggtgaaggtggataataggacctggaaagtggatgctgggagtaga
tctcttgatttagagctgacaacattatcaagtgccaatcacattgaaatgagtccgagt
gatgcaggctttcaggacagatacattgttcaggaagtaatcaaagaaatggctaagaac
agaccaattgatactaaggggaagaaaggatttaaagtacttgtgctcaatgacgttgac
aaactctctagagaagcccaacattctctccgcagaaccatggagaaatacagtgcttat
tgcagattaattctatgttgcaatagttcttctagagttacagaagcaatccgctctcga
tgtctcaatgtgcgaataaatgcaccaagtgaagaacagattgttgaagttttagaattc
attggtaagaaggaagggctgcaacttcctcctggttttgctgctcgcattgtggagaaa
tcaaatcgaaatttaaggagggccatattgtcatttgagacttgtcgtgtccaacagtat
cctttcactaacaaacaaacaattcctccaatggactgggaagagtatatttctgaaatt
gcatctgacataatgaaggaacagagcccaaaaaggttgtttcaagttcgaggaaagctc
tatgagctgctaatcaattgcattcctccagagataattttgaagaggcttctttatgag
ctattgaggaaactggatgcagaactaaagcatgaagtatgtcattgggctgcatattat
gaatataggatgcgtcttggacagaaggcgatctttcacattgaagcatttgtggccaag
ttcatgagcatttataaatccttccttatttcaacattcggctga

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