Glycine soja (wild soybean): 114394176
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Entry
114394176 CDS
T06057
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsj03016
]
114394176
Enzymes [BR:
gsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
114394176
Transfer RNA biogenesis [BR:
gsj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
114394176
Prokaryotic type
114394176
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GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7261
Motif
Other DBs
NCBI-GeneID:
114394176
NCBI-ProteinID:
XP_028211605
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Position
2:40843603..40846383
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AA seq
548 aa
AA seq
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MENSDTTLTSSSLPPPPPVSAEEPEPKKLKMSTTTSDDEETGTKKRYKRRKVAIFFAYCG
VGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVS
GRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHR
DRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNRDSGVTE
DVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEK
VNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNAN
TTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTA
PEVGLYLDECFFTSYNQKWKDHEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWL
HSLNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADPEDATTNNKGADLKEAITDNKS
ADPEVVTE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagatacaacactgacaagttcatccctgcctccaccacctccagtatct
gcggaggagccagagcccaagaagttgaagatgtccaccacaacttctgatgatgaagaa
acaggcaccaagaaaagatacaagcgccgtaaggttgctattttctttgcttactgtggt
gttggctatcagggtatgcagaaaaaccctggtgcaaagaccattgaaggtgacctagaa
gaagccttgtatgtgtctggagctgttcctgaacaggatcgtggagttcctaaacgatat
gactgggctcgctcagctagaactgataaaggtgttagtgctgttggtcaggttgtctca
ggccggttctatattgatccacctggccttgttgaccgccttaattcaaacctcccctct
cagataaggatctttggttacaaacgtgtgacagcttcttttaatgccaagaagttttgc
gaccggaggaggtatgtctatctcattcccgtgtttgctcttgatccaagctgtcatcgt
gatagagagactgtcatggctagtttgggatctggaaatgagcttgttaagtgtttggag
tgttctgagaggggccgaaaggtggtaggattagttggtaatcgtaagcagaatctggaa
ctagaagctgtggatgttgaggctggtatttcatcaaacagagactctggagttacagaa
gatgtggaggtttctttgagcaaaggtgatgataatcatttaaatgaggaatctgggaat
gataacaagggtggcatgaactgtaaaactggccttgagactgtgattcctgttcaggaa
gagggtactcctttgaatggtgaatctgtgaataattcagacattcttgaggaagaaaaa
gttaatggagaggataagccaaccaatggaagtaggttctgttatggtgagaaggagaga
gagagatttaataagattttgaagtgctttgtagggactcataatttccataacttcacc
accagaacaaaagctgaggaccctgctgctcgacgttacattatttcattcaatgcaaac
accactcttgtagttgagggcgtggaatttgtaaagtgtgaggttgtgggacagagcttc
atgcttcatcagatacggaagatgattgggctggcagtggcaatcatgagaaattgtgca
ccagagtcacttatcgatgaagctttgcagcaggatgttaacattaatgtgcctactgcc
cctgaggtgggattatatttggacgagtgcttcttcacttcatataaccagaagtggaaa
gatcatgaagagttgtcaatgaaagcatatgagaaagaagctgatgagttcaaaatgaag
tacatatattctcatattgcttccacggaacagaaggaaggaactgtcgctctttggttg
cattctttgaaccatagaaattatccagatctgcgtgttatcaacgaggaagccatcccc
aataacaagagtgctgatcccaaagaagccatcactgataacaagagtgctgatcctgaa
gatgccaccactaataacaagggtgccgatctcaaagaagccatcactgataacaagagt
gctgatcctgaagttgtgactgagtga
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