Glycine soja (wild soybean): 114394196
Help
Entry
114394196 CDS
T06057
Name
(RefSeq) uncharacterized protein LOC114394196
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114394196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114394196
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114394196
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114394196
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114394196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
DpnI_C
Motif
Other DBs
NCBI-GeneID:
114394196
NCBI-ProteinID:
XP_028211637
LinkDB
All DBs
Position
17:complement(39963087..39968239)
Genome browser
AA seq
618 aa
AA seq
DB search
MSNNNTNSSNAPNPNPQHFLQNNGVGMPPQPQLGAGQNLMPPFMQPHMNAAPFMNAANHN
HFPLHRPHMGHQQGQPHVVGGLGPQNSVVGNANYNNPMFPVQGQVMQNQAQLNLSPLQGQ
FLAQSILNMLQQPNMNMSMSMPNGQFCGPYPMQNMNQQLPMQMSNPPQGVPYGMHPSSRP
VFRFPNQVPQAMVPQNSMFSTNPQLGFVPGNQVRPQIDPNEKILAPPNANANAFVSSSPF
PSQQLQGNTSGSVNPNLAHTNNSQPPAFMKQETPNSNIKTNVPNSNWKGSPSKNLKNKPN
RGRFQGGFQKSKFHDVNNGKRGSGFPKEHNGKGPNSGRAGHYGLKPKELKQQPERSLSAT
YTVQEIQQWREARKKNHPFNNNIQKKHSECPKDSKAINREVLQRELKEVLAKQAELGVEV
AEIPSYYLKNSDNQGLQSEAKNKYTDKRKFQNKFNKKSDRKGRFAEKQKFADKDFSESPS
LKKRKPTLLQKLLSSDVKRDKSHLLQVLRFMVMNSFFRHIPDKALRYPSVEVKEKGSEVS
GEKKHLHTGKDVLNRGSEETVQKIVIFNNDNGHDCDDDENDSIVDNNLHKDPSSLVKRQC
DGGEGIKKSDEEEGEILE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaacaataccaactcctcgaatgctcctaatcctaacccccaacatttcttg
caaaacaatggtgtgggaatgccaccccagccacagttaggtgcaggccaaaacttgatg
cccccttttatgcagcctcacatgaatgcagcacctttcatgaatgctgcaaatcacaat
cattttcccttgcataggcctcatatgggtcatcaacagggtcaaccccatgtggtgggg
ggtttaggtccccaaaacagtgttgttggcaatgccaattacaacaatccaatgtttcct
gttcagggacaagtcatgcagaatcaagctcaactcaatttgtctccactccagggacaa
tttttagcacaaagtattctcaacatgcttcagcaacctaacatgaatatgagtatgagt
atgccaaatggccagttttgtggcccttatcctatgcagaatatgaatcagcagttacct
atgcaaatgtcaaaccctcctcaaggggttccgtatggtatgcatcccagttcccgcccc
gtgtttaggtttccaaaccaagtgcctcaggctatggtcccccagaattcaatgttttcc
acaaatccccagttaggttttgttcctggaaatcaggtccgcccgcagattgacccaaac
gagaaaatcctggctccgccaaatgcaaatgcaaatgcttttgtatcatcatcacctttt
ccatctcagcaattacaaggaaatacttctggatcagttaatcctaatttggctcacaca
aataactctcaacctcctgcatttatgaaacaggaaactcctaatagcaatattaaaact
aatgttccaaactctaactggaagggatcaccaagcaaaaacttaaaaaataaaccaaat
cgaggcaggtttcaaggaggattccagaagtcaaaatttcatgatgtcaacaatggaaag
aggggaagtgggtttcctaaagaacataatggcaaagggcctaacagtgggagggcagga
cactatggtttaaaaccaaaggaacttaagcagcaaccagaaagatccttgtccgcgact
tacactgtacaagaaatccaacagtggcgtgaagcacggaaaaagaatcacccttttaat
aacaacattcagaagaagcacagtgaatgcccaaaagacagcaaggccattaatagggag
gtcttacaaagagagctcaaggaggtgttagcaaagcaggctgaattgggagttgaagtt
gctgaaataccatcatactacctgaagaattctgacaatcaaggtcttcagagtgaagcg
aaaaacaaatatactgacaaaagaaaattccaaaacaagttcaacaagaaatcagacaga
aaaggtcggttcgccgagaagcagaagtttgctgacaaagatttttcagaaagcccctct
ttgaagaagaggaagccaacattattgcagaaacttttgagttcagacgtaaagagggat
aagagccacctgcttcaagttttaaggttcatggtaatgaattctttcttcagacatatt
cctgataaggcgctgagatatccgtcggttgaggttaaagaaaaagggtctgaagtttct
ggtgaaaaaaaacacttgcacactggaaaagatgttcttaaccgagggagtgaggaaaca
gttcaaaaaattgtgatcttcaataatgataatggtcatgattgtgatgatgacgagaat
gactctattgttgataataatcttcataaagatccttcttccttggttaaaagacagtgt
gatggtggagaaggaattaagaaatctgatgaagaggagggagaaattttagaatga
DBGET
integrated database retrieval system
