KEGG   Glycine soja (wild soybean): 114394405
Entry
114394405         CDS       T06057                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114394405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114394405
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     114394405
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     114394405
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR36-Utp21_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EDC4L WD40_MABP1-WDR62_2nd Beta-prop_EML_2 PEP5_VPS11_N Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_WDR41 Med13_C
Other DBs
NCBI-GeneID: 114394405
NCBI-ProteinID: XP_028211776
LinkDB
Position
18:complement(6749870..6759900)
AA seq 1352 aa
MASPNNHNSPPPIPFDMHSFFNPQPPSSSNPNPNPNPNPSSSFPPPFSPVPFHFPNFDLP
LQHQHQHRSISFPTQPIPPPSNPNAGARLMALLGNPSPTPPQPPPPEFVPASSSSSPSSS
AILAAASAAAAALTRLPSSKVPKGRRLVGEHVAYDVDVRLPGEVQPQLEVAPITKYGSDP
NPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASV
GTDGRVYVWKISEGPDDEDKPQITANIVISLQIVGEEKVEHPQICWHCHKQEILTVGMGK
HVLRIDTTKVGNGEAFVADDPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSAS
QDGTIKIWEDRKAHPLAILRPHDGNPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSA
SEEGWLLPSDTESWKCTQTLELKSSAQPSKDAFFNQVAALSHAGLLLLANAQRNAIYAVH
LEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQ
CLPPPYENMGLEKSDSSVSRDPITVEGFHSLDSSAGRTTEMSLASSASKTMLQTSSNDGG
LVARYPLSSGHVEAPISREISNSNTEAKPVTLPPSCSDADIVCIPSPPLPLSPRLSLKLS
DIRSPQSNLSDHVGDHPVNDYSIDRQMDTIHRNLSDPSNNNSNNDEKKMKQDDISSVLNP
SVMFKQPTHLITPSEITKAGSSSETNIIDRKNEGEAKIQDVVDVGNAEVEVKVVGETRSN
QSDEFGRQGSQQHPYADGKEKLFCSQASDLGIEMARDCCGMSGDAYLTEEPGQLDSTVGD
SLAQPPDASEDGLQDLAKDAHEKVSDSSTSVAVPPSPVPNAKGKRQKGKISQPSGPSSSS
PSACNSTDSSHEPIGNSSLPSAENAFPQFLAMQESLNQLLTMQKEMQKQMTMMVAVPVTK
EGRRLEAALGRNLEKAVKSNSDALWARIQEENTKSEKLLRDRIQQVTGLISNFMNKDLPV
ILEKTVKKEMASVGQAVVRAMSPAVEKIISSSIVESFQRGVGDKAVNQLDKSVNSKLEAT
VARQIQAQFQTTGKQVLQETLKSSFETSLVPAFEMSCKAMFEQVDATFQKGMVEHSTAVQ
QRLESAPTSLAMTLRDSINSASSITQTLSREVLEGHRKLVTLAATRTNSGTLNTLPVQLN
NGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCTQVNLHGLLSMV
PLPLSQGVLLSLLQQLACDINNDTPRKIVWLTDVAAAINPSDPTIAMHTRSIFEQVYQIL
NHQRSLPTMTGVDLSSIRLLLHVVNSMLMTCK
NT seq 4059 nt   +upstreamnt  +downstreamnt
atggcttcccccaacaaccacaactctccaccccccattcccttcgacatgcactccttc
ttcaacccccaaccgccctcttcctctaaccctaaccctaaccctaaccctaacccttcc
tcctccttccctccgcccttctcccccgtgcccttccacttccccaacttcgacctccct
ctccagcaccagcaccagcaccgctccatctccttccccacccaacccatccctccccct
tccaaccccaacgccggagcccgcctcatggctctcctcggcaacccctcccccaccccg
ccgcaaccccctccgcccgaattcgtccccgcctcctcctcctcctccccctcctcctcc
gccatcctcgccgccgcctccgccgcagccgcggcactcacgcgactccccagcagtaag
gtccccaagggcaggcggttggtcggggagcacgtggcttacgacgttgacgtcaggctg
cccggcgaggtccagccccagctcgaggtggctccgattaccaaatacgggtcggatcct
aacccggttctgggaaggcagattgcggtgaacaagtcgtatatatgctatggcttgaaa
caggggaacattagggtgcttaatattcacactgctgtcaggtccttgctcagaggccac
actcagagggtcacagacttggcgttctttgctgaagatgttcatctcttggctagtgtt
ggcacagatggccgtgtctatgtgtggaagatctctgaaggtccagatgatgaagataag
cctcaaattactgccaatattgttatttctcttcaaatagtgggggaggagaaagttgaa
catccccaaatttgttggcactgccacaaacaagagattttgacagttggtatgggaaaa
catgttttaaggattgataccacaaaagttggaaatggtgaagcctttgtggcagatgat
cctctgagatgtcctgtggacaagctcattgatggggttcagctggtaggcacacatgat
ggggaggtgactgatttgtcgatgtgccaatggatgacgaatcgattggtatctgcgtca
caggatggcacgataaaaatctgggaagatcgcaaggcacatccacttgcaattttgaga
ccacatgatgggaatccggttttttctgctacattttttactgctcctcatcagccggat
catattgtccttatcaccgcaggaccacaaaatcgggaagtgaagctttgggtctcagca
agtgaagaaggttggctgctcccaagtgacactgaatcatggaaatgcactcagacattg
gagttgaagagttcagctcaaccttctaaggatgcattctttaatcaagttgcagcattg
tctcatgcaggtctgcttttacttgcaaatgcccagaggaatgctatatatgctgtgcat
ttagagtatggtcctaatccagaatcaacacgcatggattatatagctgagtttactgtg
acaatgcccattctgagttttactgggaccagtgatatattgccacatggtgaacatatt
gttcaggtttattgtgttcagacacaggctattcagcagtatgctttggatctggctcag
tgcttgcctccgccttacgaaaatatgggactagagaagtcagattccagtgtttcacgc
gatcctattactgttgaaggattccactctttagattcttctgcaggtagaacaactgaa
atgtctttagccagttctgcttcaaaaacaatgttacaaacaagtagtaacgatggtgga
cttgtggcaagatatcctttgagctctggccatgttgaggcacctatttctagagaaatc
agcaattctaatactgaagctaaacctgttacattacctccttcttgtagtgatgctgat
attgtttgtattccatctccacctcttcctttgagcccaaggttatctttgaaactctcc
gatatcaggagtccacaatccaacttgagtgatcatgttggggaccatcctgttaatgat
tattcaatagacagacaaatggataccattcataggaacttgtctgacccatcgaataac
aattcaaataatgatgagaagaaaatgaagcaggatgacatttctagtgtacttaatcct
tctgtcatgtttaagcaaccaactcatctaattacaccatctgagatcacaaaagctggt
tcctcctctgagactaatataattgataggaagaatgagggagaagcaaagatccaggat
gtggttgatgtgggtaatgctgaagtggaagtgaaagtggtgggtgagacaagatctaat
caaagtgatgaatttggtcggcaggggtctcaacaacatccatatgctgatggtaaagaa
aaattattttgctctcaggcttcagatcttggtattgagatggcccgagattgctgtggg
atgtctggggacgcataccttacagaggaacctgggcaacttgattcaacagtaggagac
tcactggctcaaccacctgatgccagtgaggatggacttcaagacttagcaaaagatgcc
catgaaaaggtttctgactcatctacatctgtggcagtgcctccatctcctgtgcctaat
gcaaaagggaaaagacagaaaggtaaaatttctcaaccatcaggcccatcttcctcatct
ccaagtgcgtgcaattcaactgattcatcccatgaaccaattggaaattctagcctccca
tctgctgaaaatgctttccctcaatttctggcaatgcaagaatcgctcaatcagttattg
acaatgcaaaaagagatgcagaagcagatgacaatgatggttgctgttccagtgactaaa
gaaggtagaaggcttgaggctgccctagggagaaacctggaaaaagctgtcaagtccaac
agtgatgctttgtgggctcgaattcaggaggagaatacaaaaagtgaaaaattgttacga
gaccgtatccagcaagttacaggtttgattagtaactttatgaataaggatctaccagtg
atactggagaaaacagtaaagaaggaaatggcttcagttgggcaagcagtagtacgtgct
atgtctcctgctgtggagaaaataatatcttcttctattgtggagtctttccagagagga
gtgggtgataaggcagtgaaccaacttgataaatcagttaattcaaaacttgaagctact
gtagctaggcaaatccaagcacaatttcagacaactggcaagcaggtgcttcaggagaca
ctcaaatccagttttgaaacatcattggttcctgcatttgagatgtcatgtaaagccatg
tttgagcaagtggatgctacatttcagaaaggcatggttgaacattcaactgctgttcag
caacgccttgaatctgcacccacttcgttggcaatgacattaagggattccattaattca
gcatcatcaattactcaaaccttgagtagagaagtgcttgagggccacagaaagctagtg
acactcgcagctacaagaacaaactcaggcacattaaatactctgcctgtccagctgaac
aatggtcctttacttcatgaaaaggtcgaggtgcctctggatcccacacaagagctggca
aggttgatttctgaacggaaatatgaggaggctttcattggagctctacatagaagtgat
gtatccattgtatcttggttatgtactcaggttaatttacacggacttttgtcaatggtt
cctcttcctttaagccaaggtgtactgctttcacttcttcagcaattggcttgtgatatt
aacaatgatacaccgcgaaagattgtgtggttgacagatgtggctgctgccataaacccg
tcagacccaacgattgcgatgcacacgcgatccatctttgagcaagtctatcagatactg
aatcatcaacgtagcttgcctacaatgactggagttgatctctcaagtatccgtctttta
ttgcatgtcgtcaactccatgcttatgacatgtaaatga

DBGET integrated database retrieval system