Glycine soja (wild soybean): 114394462
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Entry
114394462 CDS
T06057
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
114394462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsj04040
]
114394462
Ion channels [BR:
gsj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114394462
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
114394462
NCBI-ProteinID:
XP_028211849
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Position
2:complement(41066343..41078212)
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AA seq
728 aa
AA seq
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MFDCGPKSEYMGGQRENFLRLEALDSTLSSSSDAGVIKSGFNIDKLSHGHGSSTTSRSFK
RGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAV
SIDPLFFYLPVINDSFHCLGIDRKLATIVTTLRTMVDVFYLIHMALQFRTAYIAPSSRVF
GRGELVIDSAQIAKRYLQRYFIIDFLSVLPIPQIVVWRFLQRSKGSDVLATKQALLYIIL
LQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDT
CWQKACSDIGCKENFLYCGNRHMEGYSAWNKTSEDIQSRCSADGDPAHFDYGIFGQVLSS
GIISSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNM
QTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEENLVQS
LPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEM
LFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALM
EVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKIMK
LRQKEDESDGTHENVGGSSYSFGAALLASKFAAHTLRGVHRNRLAKTARELVKLQKPPEP
DFSADDAD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtggtcccaagtcagaatacatgggtggccagcgggaaaattttttgagg
ttggaggccttggattctacactatcttcatcttctgatgccggagttataaaatctgga
tttaatattgataaattaagccatggtcatggaagcagcacaacttctaggtctttcaaa
aggggaatgagaaggggatctgaaggattgaaatcaattgggcgatcgcttgggttggga
gtatctagggcagtgttcccggaagatcttaaagtgtcagaaaagaagatatttgatcct
caagacaagtttctgctcttatggaacaaactttttgttatctcatgcattttggccgtg
tctatagatccactatttttttatctaccagtcattaatgattcatttcattgtcttggc
atagaccgaaagttggcaacaatagttacaaccttaaggacaatggttgatgttttctat
cttatacacatggctctccaattccgtactgcttatattgctccatcttctcgtgtcttt
gggcgtggtgagcttgtgatagattctgcacagatagccaagcgatacttgcagcggtat
ttcatcattgatttcctatccgtgttgccgataccacagattgtggtttggagatttctt
cagaggtcaaaaggttcagatgtactagcaacaaagcaggccttgttgtacattatcttg
cttcagtatgttcctagatttctccgaatggtaccgttgacttcagagcttaagagaaca
gccggtgtctttgctgaaactgcatgggcaggggctgcatattatttgctgctatacatg
cttgccagtcatatagttggtgctttttggtacttgttagctattgaacgcaatgacaca
tgctggcagaaggcttgcagtgacattgggtgcaaagaaaatttcctatattgtgggaac
cggcacatggaaggttatagtgcttggaataaaacaagtgaagatattcagtcaaggtgc
tctgcagatggtgatcctgcacattttgattatggaattttcgggcaagtcttgtcttct
ggcatcatttcatctaagaagttcatctccaaatactgttactgtttatggtgggggctc
cagaatttgagtacacttggccaggggcttcaaactagcacctatcctggggaggttatc
ttttcaatagcactagctataagtggcctcatcctttttgcccttctgattggcaacatg
cagacatatcttcaatctctcaccattaggcttgaggaaatgagagtcaaaaggcgtgat
tcagaacagtggatgcaccatcgcttactcccacaagatcttagagagcgtgtgagacgg
tatgaccaatataagtggctggcaacgcggggtgtagatgaagaaaatttagttcagagt
ctaccaaaggatcttcggagagatattaagcgtcatctctgtttggccttagtgaggagg
gttccactatttgagagtatggatgagagattgcttgatgccatatgtgagagactgaaa
ccgtgtttatttacagagaatacttacattgttcgggaaggagatccagttgatgagatg
ttgttcatcatacgtggtcgccttgagagtgttaccacagatggtgggaggagtggattt
ttcaaccgcggttttctaaaagaggctgacttctgtggggaggagcttttaacctgggcc
ctggatcctaaatctggttctaatcttccatcttctactagaacagttaaggcattaatg
gaggttgaggcttttgccttaactgctgatgagttaaaatttgttgctagtcagtttagg
cgccttcacagtagacaggttcaacacactttccgtttttactcccaacaatggaggacc
tgggctgcatgctttattcaagcagcatggcgtcggtattcaaaaaagaaaattatgaag
cttcgtcaaaaggaagatgagtcagacggaactcatgaaaatgttggtggcagttcctac
agctttggtgctgccttgttagcctcaaagtttgctgcgcacactctacgtggtgtacat
cgcaatcgacttgccaagactgccagggagttagtgaaactacagaaaccccctgagcct
gacttctctgcggatgatgctgactaa
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