Glycine soja (wild soybean): 114394518
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Entry
114394518 CDS
T06057
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114394518
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114394518
REST complex
114394518
Heterochromatin formation proteins
Other heterochromatin formation proteins
114394518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114394518
NCBI-ProteinID:
XP_028211916
LinkDB
All DBs
Position
18:18130992..18143689
Genome browser
AA seq
1381 aa
AA seq
DB search
MKRTRDDVYMSSQLKRPMVSSRGEPSGQPQMTSGGGQKLTTNDALAYLRAVKDIFQDKRE
KYDDFLEVMKDFKAQRIDTSGVIARVKELFKGHKDLILGFNTFLPKGYEITLPLEDEQPP
QKKPVEFAEAINFVGKIKARFYANDRVYKSFLDILNMYRMEAKSIAEVYKEVAALFQDHV
DLLREFTHFLPDTSGTANNSLLHDRTTIRQMHVEKKERNIASHGDHDLGADHPDPELDRC
LIRADKDQRRRDEKEKDSRDYDHDGISHKRKSGCRAEDSGAEPLHDTDENFGMHRISYAC
EDKSSLKSMYSPVLGYLDKVKDKLRNPEDYQEFLKCLNIYSKEIIARHELQSLVGNLLGK
HADLMEGFDEFLAQCEKNEGFLAGLLKKRHGPKPVKVEDRDQDRDRDDGMKERDRECRER
DKATANKDVSVPKTSLYTSKDKYAAKPISELDLSNCEQCTPSYRLLPKNYPIPPASQRTE
LGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVATKRVEE
LLEKVNANIIKGDSPICIEEHLTALNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRL
KQKQDEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKVLLAEIKEISEK
KRKEDDVLLAIAAGNRQPFIPHLEFVYPDPEIHEDLYQLIKYSCGEMCTTEQLDKAMKIW
TTFLEPMLGVPSRPQGPEDTEDVVKANKNNSSKSGTAIDDGDSSPVTNPKNLNTKRNEDE
NFPSEQINSCKQWQTNGDNKVKEDNYLDSECPAHKIETLGSITQQDKVHINASMPDEVSR
ANKQDHSIERLVNGNVSPSSGMEQISRITNVDNASGLAATPSRPGNISGAGGLGLPSLEG
ADSTRPVTSTNGAIIEDTKVHRYREDAGPFKSEREEGELSPNGDFEEDEFAVYGHAGLEA
VHKGKNGTICRQYQNRHGEEVRGEAGGENDADDEGEESPHRSMEDSENASENGDVSGTES
ADGEECSREHEEDGDHEHDNKAESEGEAEGMADANDVEGDGASLPYSECFLVTVKPLAKH
VPPVLHDKERTARVFYGNDSFYVLFRLHQTLYERIQSAKVNSSSAEKKWRASNDTGSSDQ
YGRFMDALYNLLDGSSDSTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVATEEIDN
KLLQLYAYENSRKPGRFVDLVYHENARVLLHDENIYRIECSPAPTQLSSIQLMDYGYDKP
ELTAVSMDPNFSAYLHNDFLSVVPDKMEKSGIYLKRNKRKYAISDEYSSQTLDGLEIING
LECKIVCNSSKVSYVLDTEDFLHRTRRKRRTLHQSSSCHEQAKSSIICSSRAQRFCKLFS
I
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggacaagggatgatgtttacatgagttcacaactcaaacggcctatggtgtct
tctagaggagaaccctcggggcaaccacagatgacgagtggcggtggtcagaaactaacc
acaaatgatgccttggcatatctcagggcagtaaaggacatttttcaagataagagggaa
aagtatgatgactttctggaagtcatgaaggatttcaaggctcaaagaattgatacatca
ggtgtcatagcaagagtgaaggagctgtttaaagggcacaaagatctaattttgggattt
aacaccttcttgccaaagggatatgaaattacacttccattggaggatgaacaacctccc
caaaagaagcccgttgaatttgcagaagccataaattttgtgggaaagattaaggctcgt
ttttatgccaatgaccgtgtttataagtcatttctagacatattaaatatgtacagaatg
gaagccaagtctatcgctgaggtttacaaggaggttgctgcacttttccaggaccatgtg
gatcttcttagggagtttactcattttcttcctgatacttcaggaacagccaacaattct
ctccttcacgataggacaacaattaggcaaatgcatgttgaaaagaaagaaaggaacata
gcttcacatggtgatcatgatctcggtgctgaccatcctgatccagaacttgacagatgt
ttgattagggctgataaggatcagaggaggcgtgatgagaaggaaaaggacagtagagat
tatgatcatgatggtatatctcacaagcggaaatctggttgtagggctgaagactctgga
gctgaaccattgcatgatactgatgaaaattttggcatgcaccgtatttcatatgcttgt
gaggacaaaagttctttgaaaagtatgtatagtccagtgcttggttaccttgacaaagtg
aaggataaattacgaaatcctgaggattaccaggaatttttgaagtgcctaaatatctac
agcaaggaaataattgcccgacacgagttgcaatcattggtgggcaatttactgggaaaa
catgcagatcttatggagggatttgatgaatttttggctcaatgtgagaagaatgaagga
ttccttgctggtctcctgaaaaaaagacacggaccaaaaccagtgaaggtagaggacagg
gatcaagatcgtgatagggatgacgggatgaaagaaagggatcgtgaatgccgagaaagg
gacaaagcaactgctaacaaggatgtttcagttcctaagacgtctctatataccagcaag
gataagtatgcagcgaaacctataagtgagctggatctttctaactgtgaacaatgcact
cccagttaccgtcttctaccgaaaaattacccaataccaccagctagccagagaacagaa
cttggtgcagaggtgttgaatgatcactgggtttctgttacttctggcagtgaggactat
tcctttaagcacatgcgcaaaaatcagtatgaggagagcttgtttagatgtgaagatgac
aggtttgaacttgatatgttgttagagtctgtaaatgtggcaactaagcgtgttgaagag
ctcttagaaaaggttaatgctaatataattaaaggagacagtccaatttgtatcgaggag
cacttaacagctctaaatcttaggtgcattgaacgattatatggtgatcatgggcttgat
gtaatggatgtgctaaagaagaatgcctctttagctttgccagtcatattaactcgcttg
aagcagaaacaggatgagtgggcaaggtgtcgtgctgattttaataaagtttgggctgaa
atatatgcaaagaattatcacaaatcacttgatcaccgtagtttctactttaagcagcag
gatacaaaaagcttgagcactaaagtcttactggcagaaatcaaagaaattagtgagaag
aaacgaaaagaagatgatgttcttcttgcaattgctgctggaaacagacagccttttatt
cctcacttggaatttgtgtatcctgatccagagattcatgaagatctgtatcaactcata
aaatattcatgtggagaaatgtgtacaactgaacagttggataaagctatgaagatttgg
acaacatttttagaacccatgcttggtgttccttctcgaccccaaggtccagaggataca
gaagatgttgtcaaggctaataagaataattctagcaaaagtggcactgcaattgatgat
ggtgatagtagtcctgtaacaaatcctaagaatttaaacactaaaagaaatgaggatgag
aactttccatcagagcaaataaattcctgcaaacaatggcaaacaaatggggataataag
gttaaagaagataattatcttgattcagaatgcccggcacataagattgaaaccttggga
agtattacacagcaggataaagtgcatataaatgcatccatgcctgatgaagtatcaaga
gccaataagcaagatcattccattgaacggttggtgaatggtaatgtctcaccatcctcg
ggtatggagcaaattagtagaataacaaatgtggataatgcatcaggacttgctgctact
ccatcaagacctggtaatatttctggtgcgggaggacttggtttaccttcattagagggt
gctgattctacgagaccagttacatccacaaatggggccatcattgaggacactaaagtt
cacagatatcgcgaagacgctggacccttcaaaagtgaaagagaagagggtgagttatca
cctaatggagactttgaagaggatgagtttgcagtttatggacatgctggtttggaggca
gttcataaaggaaaaaatggtaccatttgtcgacaataccaaaatagacatggggaagaa
gttcgtggtgaagcaggaggagaaaatgatgctgatgatgaaggtgaagaaagtccccat
agatcaatggaggacagtgaaaatgcttctgaaaatggtgatgtttctggtacggagtct
gctgatggtgaggagtgttctcgagaacatgaggaggatggagatcatgaacatgataac
aaggctgagagtgaaggtgaagcagaaggaatggctgatgccaatgatgttgaaggagat
ggtgcctcattgccatattcagagtgctttcttgtcactgtaaagcctctggcaaaacat
gttcctcctgtgttgcatgacaaagaaaggactgctcgagtcttttatggaaatgattcc
ttttatgtgctgtttagacttcatcagacattgtatgagaggatccaatctgcaaaggtt
aactcatcatctgctgaaaagaagtggagggcttcaaatgatacaggctctagtgatcaa
tatggcaggtttatggatgccctttacaatttactggatggttcttctgatagtacaaaa
tttgaggatgactgtcgagctattattggaactcagtcatatgtcttattcacattagac
aagctgatatataaacttgttaaacagcttcaagctgttgccactgaagagatagataac
aagctgcttcaactatatgcatatgaaaattcaagaaaacctggaagatttgttgattta
gtttatcacgaaaatgcccgtgttcttctccatgatgagaacatatatcgtattgaatgt
tctcctgcacctacccaattgtcatctattcaactgatggactatggatatgataagcct
gaattgactgctgtgtcaatggaccctaatttttcagcctatctgcacaatgacttccta
tctgttgtccctgacaaaatggagaagtctggaatttacctgaagaggaataagcgcaag
tatgctattagtgatgaatattcaagccagaccttggatggactagaaattatcaatggt
ctagagtgtaagatagtttgcaattcatccaaggtttcatacgttttagatactgaagac
tttttacatcgaacaagaagaaaaaggagaaccttgcatcagagcagttcatgccatgaa
caggcaaagtcctcaatcatttgttcaagcagagcacaacggttctgcaaattattttca
atttga
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