Glycine soja (wild soybean): 114394625
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Entry
114394625 CDS
T06057
Name
(RefSeq) 2-dehydro-3-deoxyphosphooctonate aldolase-like
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00541
Biosynthesis of various nucleotide sugars
gsj01100
Metabolic pathways
gsj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
114394625
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gsj01005
]
114394625
Enzymes [BR:
gsj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
114394625
Lipopolysaccharide biosynthesis proteins [BR:
gsj01005
]
Lipid A
114394625
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-GeneID:
114394625
NCBI-ProteinID:
XP_028212070
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Position
18:50843401..50851333
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AA seq
291 aa
AA seq
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MDPSAALLFNHLKGADPFFLLAGPNVIESEEHILRMAKNIKSVASEVGIPLVFKSSFDKA
NRTSSKSFRGPGMAEGLKILEKVKIAYDIPIVTDVHETIQCEAVGRVADIIQIPAFLCRQ
TDLLVAAAKTGKIINIKKGQFCAPSVMTNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDP
RNLEWMREANCPIVADITHSLQQPAGKMLDGGGVASGGLRELIPCIARTAVAVGVDGIFM
EVHDDPLNAPVDGPTQWPLRHFKELLEELVAIARVSKGKQRFNIDLTPFRE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctgcggcattgctatttaaccacctcaagggtgcagacccgttcttcctg
ctagcgggtcctaatgtgattgaatcggaggagcacattctgcggatggctaagaacatc
aagagtgttgcatctgaagttggaataccattggttttcaagtcaagctttgacaaagct
aaccgaacatcatcaaaatcatttcgtggcccggggatggctgagggattgaagatactc
gagaaggtaaaaatagcttatgacattcctatagtgacagatgtgcatgagaccatccag
tgtgaagcagttggcagagttgcagatatcattcagattccagcattcttgtgtcgccaa
acagatcttctagttgcagcagccaaaactgggaaaattatcaacattaagaagggccag
ttctgtgctccttctgtgatgacaaattcagctgaaaaggttcggttagctggaaatcct
aatgtgatggtttgtgagagaggaacaatgtttggatacaatgatttgattgttgatcca
cgtaacttggagtggatgagagaagccaattgtcccattgtagctgatataactcactca
ctacaacagcctgctggaaagatgttggatgggggaggtgttgcaagtggaggtcttcga
gaactaataccttgcattgcaaggacagcagttgccgttggagtggatgggatcttcatg
gaggtgcatgatgatccactgaatgcacctgttgatggcccaacacagtggcctttgcgc
cactttaaggagctacttgaagagcttgtagccattgctagggtaagcaaagggaagcaa
cggttcaacattgatctcacaccatttcgtgaataa
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