Glycine soja (wild soybean): 114394870
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Entry
114394870 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114394870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114394870
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114394870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Motif
Other DBs
NCBI-GeneID:
114394870
NCBI-ProteinID:
XP_028212345
LinkDB
All DBs
Position
18:589677..593427
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AA seq
390 aa
AA seq
DB search
MFGSAQPSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTP
AFGSSLFSTPFSSQPQQQQQQQQQQQTSLFQQQQTSSAFGFQNSLALAAPQPSLFPNAQL
TTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIM
WAEAMGKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQR
HFQADTLPWIQRLKQKEQILQQRLLRVMRIVEALEEKGCRIPLTKGEAELAEKLATITRQ
LKGSGAELSRRVQNLLTVSRVKANSNGFGSSVYLPGSTKIHEQSLGDLQEVLQQQMEAIA
RLGSVLKRDIRDMEIMMTEDTARTENGNLI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctccgctcaaccttcttcttctcccttcggcaccccttcttctacccctgct
tttggcaccccttcttcgacccctgcttttggcaccccttcttcgaccccagcattcggt
accccttccttcgctaccccttcttctacccctgcattcggtaccccttcttctacccct
gccttcggttcttccctcttctccacacccttctcttctcaaccgcaacaacaacaacaa
caacaacaacagcaacaaacttcactttttcaacaacaacaaacttcttctgctttcggc
tttcagaattccctcgcactcgcagcaccgcaaccctcgctcttcccaaatgctcaattg
accactcagatggctaacgttgcacctgttcctttctccctcgctgatcgcgatgttcag
actattgttgatgcttataaggaagatcccgggaaccccaagtacgcatttaagcatttg
ttgttcagtgtaacagaaccgcagtttagagtgaagcctgccggtgtatcagatatcatg
tgggcggaggcaatggggaagcttgagggtatggaaagtgctgatagagaacgtctgtgg
ccacaacttgttcagggttttaaggatctttcacaacgccttaagatacaagatgaagtc
attgtttctgatgcagagagattgcgtataacccaaagcaacgttaaaatgctccaaaga
cattttcaagctgatactcttccttggattcaaagactgaaacaaaaagaacaaattctc
cagcaacgtcttttaagagtaatgagaatagtggaggcattggaggaaaaaggctgccgt
atccccttaacaaaaggggaagctgaacttgctgagaaattagccacaataactagacag
ctgaaaggatctggagcggaactgtcaagaagggtacaaaatctactaactgtatctcgt
gttaaagctaatagcaatggatttggtagctccgtttatcttccagggtcaaccaaaatt
catgaacagagtcttggtgatctacaagaggttttacagcagcagatggaggccattgca
agacttggcagtgttctgaagcgagatatacgggatatggagattatgatgaccgaggac
acagcaagaactgaaaatgggaatttaatctga
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