Glycine soja (wild soybean): 114395249
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Entry
114395249 CDS
T06057
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
gsj04141
Protein processing in endoplasmic reticulum
gsj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114395249
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114395249
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114395249
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114395249
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114395249
03009 Ribosome biogenesis [BR:
gsj03009
]
114395249
03110 Chaperones and folding catalysts [BR:
gsj03110
]
114395249
04131 Membrane trafficking [BR:
gsj04131
]
114395249
03051 Proteasome [BR:
gsj03051
]
114395249
03029 Mitochondrial biogenesis [BR:
gsj03029
]
114395249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114395249
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
114395249
Spliceosome [BR:
gsj03041
]
Complex B
Other components
Prp19 complex
114395249
Complex C
Prp19-CDC5 complex
114395249
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
114395249
Chaperones and folding catalysts [BR:
gsj03110
]
Heat shock proteins
HSP70 / DNAK
114395249
Membrane trafficking [BR:
gsj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
114395249
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
114395249
Proteasome [BR:
gsj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
114395249
Mitochondrial biogenesis [BR:
gsj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
114395249
Exosome [BR:
gsj04147
]
Exosomal proteins
Proteins found in most exosomes
114395249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Dot_icm_IcmQ
DDR
FGGY_C
Motif
Other DBs
NCBI-GeneID:
114395249
NCBI-ProteinID:
XP_028212777
LinkDB
All DBs
Position
18:complement(56692734..56694750)
Genome browser
AA seq
617 aa
AA seq
DB search
MAKNQGFAVGIDLGTTYSCVAVWQGQQNRVEIIHNDQGNRTTPSFVAFTDDQRLIGDAAK
NQAATNPENTVFDAKRLIGRKYSDPTIQNDKMLWPFKVIADNNDKPMITVKYKGHEKLLS
AEEVSSMILMKMREIAEAYLETPAKSAVVTVPAYFNDSQRKATIDAGTIAGLNVMRIINE
PTAAAIAYGLDKKINCVGERNIFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDF
DNRMVNYLVQEFKRMNKVDISGNPRALRRLRTACEKAKRTLSFAVTTTIEVDSLSKGIDF
GISITRAKFEELNMDLFEKCLKTVKKCLKDAKTDKSSVHDVVLVGGSSRIPKVQELLQEF
FEGKDLCKSINPDEAVAYGAAVQAALLSDDIQNVPNLVLLDVAPLSLGISTKGDLMSVVI
PRNTTIPVKRTQEYFTVEDNQTSARIEVYEGERTRANDNNLLGFFSLLGLVPAPRGHPVD
VCFTIDVNGILSVSAEETTTGYRNEITITNDQKRLSAEQIKRMIHEAEKYQVNDMKFMKK
ANTMNALDHYVYKMRNALNNKNISSKLCLQERKKIKSVITKATDLLEGDNQRDKIEVFED
HLNEIVNLFDRVIGKFA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaccagggatttgccgtaggaatcgaccttggtacaacctactcgtgtgtt
gcagtgtggcaggggcaacaaaatagagtagaaataattcacaacgaccaagggaacaga
actacaccttcttttgtcgctttcactgacgatcaaaggttgattggtgatgctgctaag
aatcaggctgcaaccaacccagaaaacactgtctttgatgccaagaggttaattggtagg
aaatacagcgatcccactattcaaaatgataaaatgttatggccattcaaggtcatagct
gataataatgacaaacccatgatcaccgttaaatacaagggccacgagaagctcctttca
gcagaggaagtgtcatctatgatcctcatgaaaatgcgggagattgctgaggcatatttg
gaaacaccggcaaagagtgctgttgttacagtgcctgcttatttcaatgattctcagcgt
aaagccaccatagatgctggaaccatagctggccttaatgttatgcggataatcaatgaa
cccactgcagcagctattgcatatggccttgacaagaaaattaactgtgttggagagcgt
aacatttttatctttgaccttggtggtggtacttttgatgtttctctccttacaattaag
gacaaggtcttccaagtcaaggctactgcagggaacacccaccttgggggagaggacttc
gacaacagaatggtgaattacttggtgcaggagttcaaaagaatgaacaaggtcgacatt
agtggtaaccccagagctttacgaaggttgagaactgcgtgcgaaaaggcgaaaaggaca
ctctcgtttgctgttacaaccacaattgaggttgattcattatctaaaggcattgatttc
ggcatttcaatcactcgtgcaaagtttgaggaactaaatatggatctctttgagaagtgt
ctgaagactgttaagaagtgtcttaaagatgcaaagacggacaagagcagtgtacatgat
gttgtccttgttggtggttcttcgaggattcccaaagtgcaggaactattgcaggaattc
tttgagggaaaggatttgtgcaagagtatcaaccctgacgaggctgtcgcttatggagct
gccgtgcaggctgctttgttgagtgatgacattcagaatgttccaaatttggttttgttg
gatgttgcaccgctgtcacttggtatatccacaaaaggagatctcatgagtgttgtgatt
cctaggaatactactattccagttaagaggactcaagaatattttacagtggaagataac
caaacctctgcgcgtattgaggtttatgaaggcgagagaaccagagcaaatgataacaat
ttgcttggtttctttagtcttttgggattggttcctgctcctcgtggccatcctgtggat
gtatgctttacaatagatgtaaatggcattctatctgtttctgcggaggaaacaaccact
ggttataggaatgagattaccataaccaatgaccaaaaaaggctttcagctgagcagatt
aaaagaatgattcatgaagctgagaaatatcaggttaatgatatgaagttcatgaagaag
gctaatacaatgaatgctttggatcactatgtttacaagatgaggaatgcattgaataat
aagaatatcagttcaaagctttgtttacaagaaaggaagaaaatcaaatctgtaattaca
aaggcgactgatttgcttgagggtgataatcagcgggataaaatagaggtgtttgaggat
catctaaatgagattgtgaacctctttgatcgtgtcattggcaagtttgcttag
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integrated database retrieval system
