Glycine soja (wild soybean): 114395392
Help
Entry
114395392 CDS
T06057
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00730
Thiamine metabolism
gsj01100
Metabolic pathways
gsj01240
Biosynthesis of cofactors
Module
gsj_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
114395392
Enzymes [BR:
gsj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
114395392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
114395392
NCBI-ProteinID:
XP_028212961
LinkDB
All DBs
Position
18:6082635..6087872
Genome browser
AA seq
647 aa
AA seq
DB search
MASLHANVTSVVCKSGNHASQLKFTSSSFLPGFDVVGRASNAWKKELVPSSISLVPRATL
TFDPPTTNSDKTKQRKHTVDPASPDFLALPSFEQCFPKSTKEHREVTHEETGHVLKVPFR
RVHLSGEEGHFDTYDTSGPQNVNPRTGLPQLRKEWVDRREKLGYPRFTQMYYAKQGIITE
EMLYCATRENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVAS
SIEEEVYKVQWATMWGADTAMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIA
EDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTARRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHIPMHKIPENMQKQLEWCSEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPYAQAWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYG
TDEALQRGMDAMSAEFQAAKKTISGEQHGEAGGEIYLPEEYVSSKRT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacttcatgctaatgtgacatcagttgtttgcaagagtggcaaccatgcttct
caattgaaattcacaagctcttcattcttgcctgggtttgatgttgttggtcgtgcttca
aatgcttggaagaaagaacttgtcccatcttccatttccttggtgcctagagccacacta
acatttgatcccccaactaccaactcagacaaaaccaaacaaaggaagcacactgttgat
cctgcttctccagattttcttgcccttccttcatttgaacagtgctttccaaagagcacc
aaagaacacagagaagtcactcatgaagaaactggtcatgtgctcaaagttccctttcgt
cgagttcacctgtctggagaagaaggacactttgatacctatgacactagcggtccccaa
aatgtaaacccaaggactggactcccacagttgcgcaaagagtgggttgataggagggag
aaactgggttatccaagatttactcagatgtactatgctaagcaaggaatcatcacggaa
gagatgctttactgtgccactcgtgagaaccttgacccggagtttgtgaggtcagaagtt
gctcgtggacgtgctatcattccttccaacaagaaacacttggagttagagcccatgata
gttggaagaaactttttggtaaaagtaaatgccaacattggaaattctgcagttgcaagt
tctatagaagaggaagtttacaaggttcaatgggcaactatgtggggagcagatactgca
atggacctctcaactggtcgccatatccatgaaactcgagagtggatcctacgcaactct
gctgtaccagttgggactgtgcctatttatcaagcacttgaaaaagttaatgggatcgct
gaggatcttaactgggaggttttcagggacaccctgattgaacaagctgagcagggtgta
gattacttcaccatccatgcaggagttcttctgagatatgttccattaacggcaaggcgc
atgacaggaatagtatccaggggagggtctattcatgcaaagtggtgcttagcttaccac
aaagagaattttgcttatgagcactgggatgagatacttgacatctgcaaccagtatgat
gtggctctatccattggtgatgggctaagacctggatccatctatgatgcaaatgacaca
gcacaatttgctgagctcttgacacaaggagaactgacccgtagagcatgggaaaaggat
gttcaggtgatgaatgaaggacctggacacatcccaatgcacaagattcctgaaaacatg
cagaaacagttagaatggtgtagtgaagcgcctttttacactcttggtcctttaacaact
gatattgcccccggctatgatcacatcacctctgcaattggtgctgccaatattggggca
cttggtactgctcttctctgttatgtgactccaaaggaacatcttgggttgccaaaccgg
gatgacgtgaaggctggagttatagcctacaagatagcggctcatgctgctgatttagcc
aaaggtcatccatatgctcaagcctgggatgatgcattaagcaaggcaagatttgagttc
cgatggatggaccagtttgctttgtcattggatccgatgacagccatgtccttccatgac
gaaaccctgccagcagatggtgcaaaagtggctcatttctgctcaatgtgtggccctaaa
ttctgctctatgaagataacggaggatgtgaggaagtatgctgaggaacatggctatgga
actgatgaagctttgcagcgtgggatggatgctatgagtgctgaatttcaagctgccaag
aaaactatcagcggggagcaacatggtgaagctggcggagagatttacttgccagaagaa
tacgttagttccaagaggacttaa
DBGET
integrated database retrieval system
