KEGG   Glycine soja (wild soybean): 114395541
Entry
114395541         CDS       T06057                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
gsj03015  mRNA surveillance pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114395541
  09122 Translation
   03013 Nucleocytoplasmic transport
    114395541
   03015 mRNA surveillance pathway
    114395541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114395541
   03041 Spliceosome [BR:gsj03041]
    114395541
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114395541
    TREX complex
     114395541
Spliceosome [BR:gsj03041]
 Complex C
  Other components
   EJC/TREX
    114395541
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114395541
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 114395541
NCBI-ProteinID: XP_028213149
LinkDB
Position
18:3401682..3406919
AA seq 298 aa
MASSLDMSLDDRIKNRSNRGRGRGGRGRAHSGRGPSGALNGGRMAGAVSSRRMAGASNGG
RTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVS
NLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLL
DGKPMKIEIVGSNSELPISARVNVTGVNGRRKRTVVMTPRGGQAGGGPTMPNRGAGRGRR
GGPRSGSGRGGGGGRGRGRGSRGGGGGRGRGRKDAVEKSAEELDKELETYHAEAMNIS
NT seq 897 nt   +upstreamnt  +downstreamnt
atggcttcttccttggatatgtcgcttgatgatagaataaagaacagaagtaacagaggg
agaggtagaggaggacgtggtagagcccattctggccgtggaccaagtggcgctcttaat
ggtggaagaatggctggtgctgttagtagtagaagaatggctggtgctagtaatggtgga
agaacaactggtgctgttcgtagaggtcctcttatggttaacactcggccgtcatcgtat
gctattgccaagtctattcgcagagctaggccctttccatggcagcatgatttgtttgaa
gatagcttaagagctgctgggattcaaggagtagaagttggcaccaagttgtatgtttcc
aatttggaccatggagtgaccaatgaagacataagggaacttttctctgagcttggagag
ttgaagcgttttgctgttcattatgacaaaaatggacatccaagtggttcagctgaagtc
gtttatactagaagaagtgatgcatttgctgctcttaaacgatataataatgtacttttg
gatggaaagcccatgaagattgagattgttggttccaattcagaattgcctataagtgct
cgggtgaatgtcactggggtgaatgggcgcaggaagaggactgttgtaatgacgcctaga
ggtggccaagctggaggtggtcctactatgcctaatcgtggtgctggtcggggacgtcga
ggtggcccaaggagtggcagtggacgtggtggaggtggtggtcgaggccgtggtcgcggc
agcaggggtggtggtggaggtagaggtcgtggaagaaaggatgctgttgagaagtcagcg
gaggaacttgacaaggagctggagacctatcatgctgaagccatgaacatctcttga

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