Glycine soja (wild soybean): 114396112
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Entry
114396112 CDS
T06057
Name
(RefSeq) pectate lyase-like isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114396112
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114396112
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114396112
NCBI-ProteinID:
XP_028213807
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Position
18:53856853..53860013
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AA seq
440 aa
AA seq
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MAGSASKVTFIFLVAFAISIPCLEAGIAEFDDFLKAQADEAHEIALRSYEPDPINVTAEF
NIHVHRALMEESNDTRRELKQKYRGPCLATNPIDRCWRCRKDWAQDRYRLASCGKGFGRR
AVGGLHGKIYVVTDSSDDEPINPRPGTLRYGVLQREPLWIIFAQSMVITLKFELLISSDK
TIDGRGANVVIKGGAGLAMQFVNNIIIHGIRINKIKSMEGTMLRDLWNHVGIRTRCDGDA
VSIFGSSNIWLDHLSLSECEDGLIDIVQGSTGITISNCHMTKHNDVMLFGASDTYAGDKI
MQVTVAFNHFGQGLIQRMPRCRWGFVHVINNDYTHWLMYAIGGSSEPTILSQGNRFIAPN
NNAAKEITHRDYAPPEEWSKWQWKSENDLFMNGATFLQSGAPLGKLPFNKGLMMKPRPGA
EANRLTRFAGALNCKVGKPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagtgcaagtaaggttacctttatcttcttggttgcttttgccatttctatt
ccatgccttgaggcgggcattgctgagtttgacgattttctgaaagcacaagctgatgag
gcccatgagatcgctcttcgctcctacgaacctgaccctataaacgttacagccgagttc
aatatccatgttcatagggcattaatggaggaatcaaacgacacaaggagggaactaaag
cagaaataccgtggaccatgcttggccacgaacccaatcgatcgttgttggaggtgtagg
aaagattgggcacaagaccgttataggttagccagttgtggcaagggtttcggaagaagg
gccgtgggaggactccacggcaaaatctacgtcgtcaccgattcctccgatgacgaaccc
attaaccctagacccgggactctcaggtacggtgttctccaaagggaaccactgtggatc
atatttgcacagagcatggtgatcacattgaagttcgagctgttgatttcttcggacaag
accatcgacggccgcggcgccaacgtggtgatcaagggtggtgctggccttgccatgcag
tttgtgaacaacattattattcacgggattcgcatcaacaagatcaagtccatggaaggt
accatgcttagggacctgtggaaccacgttggaataagaacaaggtgtgatggggatgct
gtgtccatttttggttcttccaacatttggctcgatcatctttcgctgtctgaatgcgag
gatggtctcattgatattgtccagggctccactggaatcaccatctcaaattgtcacatg
accaaacataacgatgtaatgctgtttggagctagcgacacctacgccggtgacaagata
atgcaggttacagtggcattcaaccactttggtcaggggctgatccagagaatgccaagg
tgcagatggggtttcgtccatgtgataaacaatgactacactcactggctgatgtacgca
atcggtggcagctcagagccaacgattctgagccagggaaaccggttcattgcgcccaac
aacaacgctgccaaggaaatcacacacagggactatgctccacctgaagaatggagcaaa
tggcagtggaaatcagagaacgacctcttcatgaatggggctacttttcttcagtcagga
gcacctcttgggaagcttccattcaacaaagggctcatgatgaaacctagacctggggcc
gaagccaacaggctcacacgctttgctggtgccctaaattgcaaggtgggtaagccttgc
tag
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