Glycine soja (wild soybean): 114396132
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Entry
114396132 CDS
T06057
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114396132
Membrane trafficking [BR:
gsj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
114396132
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
114396132
NCBI-ProteinID:
XP_028213828
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All DBs
Position
18:complement(51966721..51979808)
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AA seq
1121 aa
AA seq
DB search
MYMAYGWPQVIPLEQGLCPSAQKIVYLKVINRTLLVVSPTHFELWSTSQHRVRLGKYKRD
SDSLQREGENLQAVWSPDAKLIAILTSAFFLHIFKVQLSDKRIHTGGKQPSALCLATISL
LLTEQVPFTAKDLSVSNIVSDNKHMLLGLSDGTLYSMSWKGEFYGAFQFYPQPTASFDNS
QMPLTLENGLSPKSHPKVLMSNHIIPRTSEINQLELCLPLRFLFVLYSDGELVSCSVSKK
GLKQVDCIKAEKRLACGDAVCASVALEQQILAVGTKRGIVELYDLAESVSLIRAVSLYDW
GYSMDDTGPVSFIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPISKP
NHDCKYEPLMGGTSLMQWDEYGYRLYAIEVGSSERILSFSFGKCCLSRGVSGTTYIRQVI
YGEDRLLIVQSEETDELKMLHLKLPVSYISQNWPVQHVAASQDGMYLAVAGLHGLILYDI
RLKRWRVFGDVTQEQKIQCKGLLWLGKIVVVCNYVDSSNTYELLFYPRYHLDQSSLLCRK
PLLAKPMVMDVYQDYMLLTYRPFVVHIFHVKLFGELTPSGNPDLQLSAVRELSIMTAKSH
PAAMRFIPDQLPRESISNNLVLSDSLTREPARCLILRANGELSLLDLDDGRERNLTDSVE
LFWVTCGQSEDKTNLIEEVSWLDYGHRGMQVWYPSPGANSFKQEDFLQLDPELEFDREVY
PLGLLPNAGVVVGVSQRMSFPASAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRLAE
LSAEKPHFSHCLEWLLFTVFEADISRPNVNKNQISVVKHAKRSLLEKTCDLIRNFPEYLD
VVVSVARKTDGRHWADLFTAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYCA
LRLLQATLDESLYELAGELVRFLLRSGREYDQASNDSDKLSPRFLGYFLFRSSEQKQSLD
KSTSFKEQSAHVTSVKNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSARL
ENFASGLELISQKLQMGTLQSRLDADFLLSHMCSVKFKEWIVVLATLLRRSEVLFDLFHH
DVRLWKAYSTTLESHPAFTEYQDLLEDLEERLSSVANVEGK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatgggtggcctcaggtcatccctctggagcaaggactgtgtccctct
gcacagaagattgtgtacctcaaagtcatcaatcgcacgttgctcgttgtctcccccact
cactttgaactctggagcacttcccagcatagagtgagattggggaagtacaagagagat
tcagattcattgcagagggaaggagaaaacttgcaggccgtgtggagccctgatgccaaa
ttaatcgctattcttacatctgcgttctttcttcacattttcaaggtccagctatcagat
aaaagaatacacactggtgggaaacaaccctctgctttgtgcctagctactatttctctt
ctgcttacagagcaagttccttttacagcaaaggatttgtcagtgagcaatattgttagt
gataacaaacatatgctacttggactttctgatggaactttatacagtatgtcttggaaa
ggggagttctatggagcttttcaattttatccacaacctactgctagctttgacaattct
caaatgccacttactctagagaatggtctttctcctaaaagtcacccaaaggttcttatg
tccaatcacattattcctagaacgtctgaaatcaaccaactggagctttgccttccattg
aggttcctatttgtcttgtattctgacggggaacttgtctcatgttctgtgagtaaaaaa
ggcctaaagcaagttgactgtatcaaagcagaaaagagattggcttgtggtgatgctgtc
tgtgcttcagtagctctagagcagcaaattcttgctgttggtaccaaaagaggaatagtg
gagttgtatgatttggctgaatcagtatcacttatacgtgcagtctctttgtatgactgg
ggatattcaatggatgacactggccctgttagtttcattgcttggacacctgataattcc
gcttttgcagttgggtggaagttaagggggcttacagtttggtctgtttctgggtgtcgc
ttgatgtcaacaatccgacaaataggtttaagttctgtgtcttctccaatatctaagcca
aaccatgattgtaagtatgaaccattgatgggtggtacctcactgatgcagtgggatgaa
tatggatatagactttatgctattgaggtggggtcttcagagagaattctatcgttctca
tttgggaaatgctgtcttagcagaggtgtttcaggcactacatacatccggcaagtgatt
tatggggaagaccgtttactcattgtgcagtcagaagagactgatgaactcaaaatgcta
catcttaagcttccagtttcttatatttcccaaaactggcctgttcaacatgtggcagct
agccaggatggcatgtacttagctgttgctggtcttcatggtttgatattgtatgatata
cgattgaaaagatggagagtatttggagatgttactcaggagcaaaagattcagtgtaaa
ggtttgttatggctggggaagattgtcgttgtctgcaactatgttgattcatcaaatacg
tatgaattgctcttttacccaagatatcaccttgatcaaagctcattactctgtcgaaaa
ccattgcttgctaaaccaatggtgatggatgtgtaccaagattatatgctgcttacatat
agaccatttgttgtccacatattccatgtgaagttatttggtgaattaactccttcagga
aatccagatttacagctttctgcagtacgagaactttcaattatgactgccaagagccat
cctgcagcaatgcgattcattcctgatcaacttccaagagaatctatttcaaacaatttg
gttttgtcagattcattaacaagagagccagcaagatgtttgatattgagagcaaatggg
gagctttcacttcttgacttggatgatggacgggagagaaatctcactgattcagttgaa
ctattttgggtcacctgtggtcagtctgaggataaaacaaatttgattgaggaagtttca
tggttagattatggtcatcgaggcatgcaggtttggtatccatctccaggtgctaattct
tttaagcaggaagatttcttacagttggatccggagctggagtttgatcgtgaagtatac
cctttgggacttcttccaaatgctggtgtagttgttggtgtttcccagagaatgtcattt
ccagcaagtgctgaatttccatgttttgaaccatctcctcaagcacaaacaatactgcac
tgcctactccgccatcttcttcagagggacaaaattgaggaagctttaaggctggcagag
ctatcagctgagaagcctcatttttcacattgtctagagtggcttctttttacagtattt
gaagcagatatatccaggccaaatgtgaacaagaaccagatctcagttgttaaacatgct
aaaaggtctcttttagagaagacctgtgacctgatcaggaattttccggagtaccttgat
gttgttgtaagtgttgcaagaaaaactgatggtcgtcattgggcagatttgttcactgct
gctggaagatcaacagaattgtttgaggaatgctttcaacgtagatggtatcgcactgca
gcttgttatatacttgtgattgccaaacttgaaggtcctgctgtcagtcagtactgtgct
ttacgattattacaggcaacacttgatgaatcattgtacgagcttgctggggagctggtg
cggttcttgctaagatctggtagggaatatgaccaagcatcaaacgattcagataaactg
tctccaagatttttaggctattttctttttcgttctagtgagcagaagcaatcattggat
aaaagcacctcattcaaagaacaaagtgctcatgttacctctgttaagaatattttagaa
aaccatgctagttacctgatgtctgggaaagagctctccaagcttgttgcatttgtaaaa
ggaactcagtttgatttagtggagtatctacaacgtgaaagatatggaagtgctcggttg
gagaattttgcttctgggcttgaactaataagccaaaagcttcaaatgggaacattacag
agccgtttggatgctgactttctcctatctcatatgtgctctgtcaagtttaaggaatgg
atagttgtcctggctactctcttaagacgttctgaggttctttttgacttattccatcat
gatgttcggctgtggaaagcatacagcaccaccctggagtcacacccagcatttacagaa
tatcaagatttgctggaagacctggaagagagactttcatcagttgcaaatgtagaagga
aaatga
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