Glycine soja (wild soybean): 114396206
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Entry
114396206 CDS
T06057
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114396206
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
114396206
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Ssol_1539-like_2nd
CBM9_2
Motif
Other DBs
NCBI-GeneID:
114396206
NCBI-ProteinID:
XP_028213913
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Position
18:8731..46299
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AA seq
1952 aa
AA seq
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MWTNVFKIGSMHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLRGRHSSVVETAQTAVSGLRVVASGLWLAPGD
SEEVAAALSQALRNCIERALLGLYYMRFGDVFSKFHQFQREEIFRRGQPAVEFVFAATEE
AIFIHVIVSSKHIRMLSTADLEKVLKHSMESTYRLPVIVSPHGIRGSLTGCSPSDLVKQS
YFSSSTKFRVSNGIIGLPYHVSQGVGCQLRGQNCYVEVSLGFPRSGTDNTLQPNKNSVRN
LPKLHVAESPVVGRSDHKGPPDHLLDYDKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNW
MGPSLPGSSSFIHCAGNVDCTEDPWTEINGTRTQSSYDSSSNSNNSSISSLSASSSDSDY
KTTGPSELEADADSLTCRQSMVSSADQLDSDGPKLGSKRSRTGVTELLSTATNIPVQDAY
MSDFGSMEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPF
GEPPGTAESQALMLSAPDCGDVNSSPGGVIDVPDQILLPVGFASFESFNPPPSTSIEECL
NKSQDNLNNSMSLGPTNQNQLLYTREFDHIMKAEAMMTFAPEFGAVDTPTCEFSTTLFRS
PYFPKSRKAKSSTSSSSNYLYGAAPPTSTCTEGSEGKNGKSVNTKTGSGKHDASTMSLHS
KYYYTFVESRKEKNDKNPATCNDNSITKSEGMPPLSNIGSNAIVKSAIRKTTDCTHEAEQ
FLLSAKTLLATDITCIMLQASMCRLRHILLSSGNLMPAGLSRSTGVSFLNQLPSDPSMTT
DNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVVP
SFPHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDVDCGDGPYGLLAMQEQ
WRRGFCCGPSMVHAGCGGSLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKS
AFPNLEGPLSVTDWCKGRNQLIDTGSVVDGVSAESNINECRDSSEPMSPSQSSVGGSSSI
KVSNMMDKVDETSQRRSGQDLCSTESEQQTCSRLKPTLIALPFPSILVGYQDDWLKTSAN
SLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLG
NQIEIESAKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKA
LRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQSDRERR
SSLHSQVVKALSGLATVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVIL
KETSFTVYSKARRISRGISSDFAQSAFSSRSHSGLTQMPSPISGMWKDCVGPRMAGHSLP
REGDIDASLRPGTWDNSWQPTRTGGLSCDPSRTGDNFLHDEIRYMFEPLFILAEPGSLEN
GISVIGSPTSESSKALADDSSGNYVQSTSTAGSVESASSTDASGSDPKTPPSLHCCYGWT
EDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLILQSCDPGLA
KPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGMSATSNGSSLQQS
DMSLIPERTLPSSPSPLYSPHTKSPGFMKGSLGQPTARKQLIGGHSMVDNSRGLLHWAQS
ISFVAVSMDHTLQLVLPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPTTVLQL
PTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRANQKEEWPSVLSVSLIDY
YGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLER
RTALPFHCDMVLRLRRLLHFADKELSKQSEKS
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgttttcaaaatcggaagtatgcatcagatatcttggtttcagtttctt
cctcatgaacctgacctgaaccctctacctgacaaaagtgttaaagtggaccaaaaggat
gctgcaatgttactggtgctttcatcacatctgcaacttcagaaggaggggtttctcagc
acatggaccaattcctttgttggaccttgggatccatcccagggattgcataatccagat
gaaaagattaagctgtggctttttcttcgggggcgtcattcatcagttgttgagactgct
cagacagcagtatctggattaagagttgttgcttctgggctttggttggctcctggggat
tcagaagaggttgcagctgctctctctcaggctttaaggaattgtatagaaagagctttg
cttgggctttattacatgagatttggagatgtattttcaaagtttcatcaatttcaaaga
gaagaaattttcagaagaggacagcctgcagttgaatttgtctttgctgcaactgaggag
gcaatcttcatacatgtcatagtatcctcaaagcatatccgaatgctttccacagctgat
ctggaaaaagtattaaaacattctatggagtcgacatatagacttccagtaattgtttct
ccgcatggaattcgtggcagcttgactggttgttctcctagtgatcttgtcaagcaaagc
tatttcagcagttctaccaaatttagggtgtccaatggaattataggtctcccatatcat
gtttcccagggtgttggttgccagctgagggggcagaattgttatgttgaagtaagtctt
ggcttccctagatctggaactgacaacacgttgcagccaaacaaaaatagtgtcaggaat
ttacccaaacttcatgttgctgaatctcctgttgtgggacgaagtgatcacaagggacca
ccagatcatttgttggattacgataaaacgtttctctatccagctgaggcagtgcttgtg
ccagtcttacaaacatcattagcaaggtcttccttgagaagattttggctgcagaattgg
atgggaccatccctgcctggttcctcttcctttattcactgtgctggtaatgtggattgt
actgaagatccttggactgaaatcaatggaacccgcacacaaagtagttatgatagtagt
agcaatagcaataatagcagtattagtagcttaagtgccagctctagtgatagtgattac
aagactacaggaccaagtgaactagaggcagatgctgattctttgacgtgtagacagtct
atggtatcttctgctgatcagttggacagtgatggccccaaattgggctctaagcggtct
cgaacaggggtgacagagttgttaagtacagctacaaacattcctgtgcaagatgcttac
atgtctgattttggttccatggaagtgaacaattcagccattacaggagtaggaaatgag
ccaattgggtcttactgggactgggatgatgatgatagaggcatggaaatggatattcaa
gcccttctatcagagtttggtgattttggtgacttctttgaaaatgatgttttacctttt
ggagagcccccaggaactgcagaatctcaggcactcatgctttctgccccggattgtgga
gatgtcaacagcagtccaggtggtgtgatagatgttccagatcaaatacttttgcctgtt
ggctttgcttcctttgagagctttaacccccctccttcaacatccatagaagaatgtctt
aacaaaagtcaagataacttgaataactccatgtctttgggtccaaccaatcaaaatcaa
ctgttgtatacaagggagtttgatcatataatgaaagctgaagcaatgatgacattcgct
cctgaatttggagctgttgatacccctacttgtgagttctccacaacattattcagaagc
ccatattttccgaaatctcgaaaagcaaagagttcaacttcaagttcaagcaattactta
tatggtgcagcaccgcccacttctacttgcactgaaggatcagaggggaagaatggaaag
tccgtcaacacaaaaacaggttctggaaaacatgatgctagtactatgagtctccactca
aaatattactacacttttgtggaaagtaggaaagaaaaaaatgataaaaatcctgccact
tgcaatgataacagcataactaaatctgaggggatgccaccactctcaaacattggttct
aatgctattgtcaagtctgccataaggaagacaactgattgcacacatgaagcagagcag
ttccttctatctgcaaaaactttgttggcaactgatatcacatgtattatgttgcaagct
tccatgtgcaggttacgccatattctcttgtcttcaggtaacctaatgcctgctggtttg
agtaggtcaactggggtttcatttttgaatcagcttcctagtgatccaagtatgacaaca
gacaacatatctggcaagtatgatgttaagaagaaagaaaatataccaattagaattgca
ggtgatattgatggaggaatgcttgatgggcaccttaatgcccctgttggtgtttggcgc
acattaggagcttccaaagttgtaaaaccttcaaattcacctaacatggaagttgttcct
tcctttcctcataattctttcaatgaagaaggtatcctttcttatggtcaaaggaaacca
cttcaggagcttcttgatgggatagcattacttgtccaacaagctatttcctttgttgat
ctggccttggatgtggattgtggtgatggtccttatggtttgcttgcaatgcaagaacag
tggaggcgtggattttgttgtgggccttccatggtccatgctggctgtgggggaagtctt
gcctcttctcattcattggacattgctggcttggagttagtggatccactttctgctgat
gttcatgcatccactgtcatcagtttgctgcagtctgacataaaaacagctttgaaatct
gcttttcccaatttggaagggccattatctgtaactgattggtgcaaaggacgcaatcaa
ttgattgatactggaagcgtagttgatggagtttctgctgaatccaacattaatgaatgt
agggattcttcagaaccaatgagtccatctcaatcatctgttggtggatcttccagtatt
aaggtttccaacatgatggataaggtggatgagacttctcaaaggagatctggccaagat
ttatgcagcacagagtcagagcagcaaacatgttcccggctaaaacctactctcattgct
cttccgtttccttctatacttgtagggtatcaggatgattggctcaagacatcagcaaac
tctttgcagcactgggagaaggctcctctagagccctatgctctacagaaacctattacg
tatcatgttgtatgtcccgacattgatccccttacttctgctgctgctgatttttttcaa
caactaggaacagtgtatgagacatgcaagctaggtactcattcacctcaaggcttgggg
aatcagatagagatagagtctgcaaagttgtcatcttgtggttttgttttacttgattgc
ccccaatcaatgaagattgagagcagcaatgcatctcttgttggttcagtaagtgattat
tttttatctttatctaatggttgggacctgactagttatctcaagtctctttcaaaggca
cttagaggtttgaaaattggctcttgcttttctacaaaccccagcgaaggaagtaacagc
tcatgcttggtaatctatgtggtgtgcccatttcctgatcccactgcaattttgcaaact
gtaattgagtcttctgttgccattggatcggttgtccaacagtcggatagagagaggaga
tctagcttgcatagtcaggttgtgaaggcattaagtggcttggccactgtcgatgaagct
tcagcgtctaatatccttgtgctttctgggtttagtattccaaaattggtcttgcagata
gttacagtggatgccattttcagagtcacaagcccatctgttagtgagcttgtcatttta
aaagagacttcctttactgtatacagcaaggctcgtcgcatttcacgtggaatctctagt
gattttgctcaatctgcattttctagtagatctcattctggtttgacacaaatgccttct
cccatctctgggatgtggaaagactgtgttggtcctcgaatggcaggacattctcttcca
agagagggtgacattgatgctagcttgaggcctggtacttgggataattcttggcaacca
acaaggactggggggttaagctgtgatccaagtagaactggggataattttcttcatgat
gaaattcgttacatgtttgaacccctttttattctcgcagaaccaggttctcttgaaaat
ggtatttcagttattggtagtcccacttcagaatcttccaaggcattggcagatgacagt
agtggtaactatgtacagagtacaagtacagcaggaagtgtggagtctgcttcaagcact
gatgcatctgggtccgatccaaagactcctccaagcctacattgttgctatggatggact
gaggactggcgttggctcgtgtgcatctggacagactcaaggggagaattgctggactgc
aatattttcccctttggtggaataagcagcaggcaggatacaaagggtctgcagtgccta
tttgttcaaattcttcaacaaggttgtctgatacttcaatcttgtgatcctggccttgca
aagcctcgagattttgtgatagcacgcattggaggtttttatgagctcgagtaccttgag
tggcagaaagccatttattcagttggtgtatctgagatgaagagatggcctctgcaattg
cggaaatctatgtctgatgggatgtctgcaactagtaatggttcttctttgcaacaatca
gatatgagtttgatcccagaaagaactcttccttcctcaccgagtcctttgtacagccct
cataccaaatcccctggttttatgaaaggcagtttagggcaacctactgcaagaaagcaa
cttatcggtggacattctatggttgacaattctaggggtttgcttcattgggcgcaaagc
attagttttgttgcagtttccatggaccatactttacaactagttctcccagcagattca
tcaactcctggttacatagaaggtttcactccagttaagtctcttggttctacgtcttct
gcatatattctaattccttctcctagcatgcggttccttcctacaacagttcttcaactc
ccaacatgcctcacagcagagtcgccaccactagctcatctgcttcacagcaagggttct
gctcttcctctctctactggatttgtggtttcaaaagctgtaccttccatgaggaaggac
tatagagccaaccaaaaagaagaatggccctctgtactttcagtgagcctcattgattat
tatggaggtactaacatcccccaagagaagattgtccgaggaattaacaagcaaggtggt
agaagtttaagctgggaagctaaagattttgaaattgagacccacttggttctggagtct
cttgcagcagagcttcatgccttgtcatggatgacagtgagccccacatacttagagcgg
cgaacagcacttcctttccactgtgacatggttctaagactaagaagacttcttcacttt
gctgataaagagctctccaagcagtccgagaaatcttga
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