Glycine soja (wild soybean): 114396593
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Entry
114396593 CDS
T06057
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114396593
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114396593
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
114396593
NCBI-ProteinID:
XP_028214458
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Position
18:51093555..51108776
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AA seq
1223 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDILQGNYVDHHVSTREQITLQDSMEGVVYTTSQFGLDERFGDGDASQIGLDLDEVL
LNDKAATSEHDGFGASLHQNDEKKPEIDDLPTAAEVSKYAEGPSTPGLEEPNLFGTQMDQ
GNNEVDYHNSADLISLEATQKESLNHQRENDAIDCSLQNNGNHISLDLHHEDNACDLVEM
DSKKEKQEHLACQVVMKDQENLIPNDHCLTSLPLVDSSNKDYPTTLLPECEGGMINASDV
AEKEEDLQDGVLANNNLVSAPLANFVVSAPLMNNEKVASPSHVTSDQEDLSCKPLSNNMD
ESRGPGSDGHLQDGNTLSKHEVLNDIEISKSEGQSCLFDDAPVSNVISPLGSPGRPEVVD
EEAQASQELKEAETLNHVSHEAVQPTESILRPCMSHLGQPSLSFIEGEKCHVTDASNPAL
SYQETMEPSVSKETPNSGKTDMQLESQIFSNKVESINRSAATDMPEPEKLLSAYQHDGEA
NDLLMASTPDNQGATEGHTGAAGEKYISGKKRSYTESTLTVQSMDLIESYTGAQSKRTAE
SVPDDDDLLSSILVGRKSSVLKMKPSPAAPEIASMKRVRSASAPRTSALKRKVHMDDMMV
LHGDTIRQQLTNTEDIRRIRKKAPCTRHEILMIQRQFLEDEFFHEPIFMDLSTDLTILRN
ETFDLTGIKVIEYGLDSSSVEKTNDQESYSRTHTEIHGVEGNNEPMAVQLQEDAEVQPTE
VPVLSESHQSKVNLGSHDIDAHGHTSIISHVEELDSSQNVELNNLRANIAVSEAENCSVG
PGHESSSLTEVFENDFAASLALMDKTNDLVDSIHSNILSIPNAENLNTIPILEDDFVEDQ
SDRNGVGAIKCSMETGTQVQTDGVDANDLYTSLATGSTETDEFTNIQASFNGDLPLEENG
NSLLGQLNEDQIVASGMDCDDKDARPDCIFIENAKVDCLQSEALGLDEKESLLKDEEIPV
CQEAELQSTMCPEIRSPLVDQNDENDMIANDTGFLNVGDDEIIEDDDDYQSCAEGTNLEN
SGWSSRTRAVANYLQTVFDKEDLHGRKELHLNNLLVGKTRKEASRMFFETLVLKTRDYVH
VEQTKPFANVSIKPRMKLMKSDF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgttttactcacagtttattttggccaagaaagggccacttgggactatatggatagct
gcgcatttggagaggaagctccggaagaaccaggtggcggataccgacattggcgtctcc
gtagattccattcttttccctgaagtaccaattgcactccgtttgtccagccatcttcta
cttggtgtggtgaggatatattctagaaaggtgaattacctttttgatgactgcagtgaa
gccttgcttaagattaagcaagcttttcgttccacagcagttgatttgccacctgaagag
tccactgcaccttaccattccatcaccttacctgagacttttgatcttgatgattttgaa
ctaccagataatgacattcttcaaggtaactatgttgatcaccatgtcagtactagggag
cagattacactgcaagattctatggagggtgtggtttacactacttcacagtttggcttg
gatgagcgctttggtgacggtgatgcttctcaaattgggttagaccttgatgaggttttg
ttaaatgacaaagctgctacttcggagcatgatggctttggtgctagtcttcatcaaaat
gatgaaaagaaaccggagattgatgatttacccactgctgctgaagtcagtaaatatgct
gaaggtccatcaacccctggactggaagagccaaatttatttggaactcagatggatcag
ggcaataatgaagttgattatcataattcagcagatttaatatcactagaggccacacag
aaagaatcgctgaatcaccaaagggagaatgatgcaattgattgctccttgcaaaataat
gggaatcatatttctttagatttgcatcatgaagataatgcctgcgatctggttgaaatg
gatagcaaaaaagagaagcaggagcatttagcatgccaggttgtaatgaaggatcaagaa
aatttgatacctaatgatcattgcttaacgtcattacccttggtggactcttccaataaa
gactaccctaccaccctgttaccagaatgtgaaggtgggatgatcaatgcttctgatgta
gctgagaaggaggaggacttacaagatggagttttggcaaacaataacctagtttctgct
cctttggcaaattttgttgtttctgctcctttgatgaacaatgaaaaagttgcttctcct
tctcatgttacttctgatcaagaggacctctcatgtaaaccgctgtctaacaacatggat
gaatctcggggtccaggatctgatggtcatttgcaggatggtaacacattatcaaagcat
gaagttctgaatgacattgaaatttctaagagtgaggggcaatcctgtctgtttgacgat
gctccagtatccaatgttatcagtcctctaggatcacctggtagacctgaagttgttgat
gaggaagctcaggcctctcaagaactgaaggaagcagagactttaaaccatgtatctcat
gaagctgtgcagcccactgaatcaatccttcggccatgcatgtcccatctgggccagcct
tctctgtcatttattgaaggtgaaaaatgtcatgtaactgatgcttcaaatcctgcttta
agttaccaagagactatggagccttctgtatctaaagaaacacctaattcagggaaaact
gatatgcaacttgagagtcagatatttagtaataaagtagaaagtattaacagatctgct
gctactgacatgccagagcctgaaaagttgctctcagcttaccaacatgatggtgaagca
aatgatttgctgatggcatctactcctgacaatcagggtgcaactgaaggccatacaggt
gctgcaggagaaaaatacatctccggtaaaaaacgtagctacacagaaagtactcttaca
gtgcagagtatggatttgattgaatcttacacgggagctcaatccaagagaactgctgag
tctgttcccgatgatgatgatctactgtcatctatattagttggtagaaagtcttcagtc
ttgaaaatgaagcccagtcctgcagcccctgaaatagcatcaatgaagcgtgttcgttct
gcttctgcaccacgtactagtgccttaaagaggaaggtgcatatggatgatatgatggtc
ttgcatggcgatacaatacgccaacaattgacaaatacggaagacattcgtcgcatacgg
aaaaaagctccttgcactcgtcatgagattttaatgattcaaagacaatttttggaggat
gaatttttccatgaaccaatatttatggatttgtctactgatttgactattctgcgaaat
gagacatttgatctgactggaatcaaggttattgagtatggtttagatagttcttctgta
gaaaaaacaaatgatcaagagtcctattctagaacacatactgaaattcatggagtggag
ggtaataatgaacctatggcagtccaactccaagaagatgcagaagtgcaacctactgag
gtacctgttttgtctgagagtcatcagtctaaggttaacttgggatctcatgatattgat
gctcatgggcacacgagtattatttctcatgtggaggagcttgacagttctcaaaatgtt
gaattgaacaatctcagagcaaatattgcagtttctgaagctgagaattgctctgttggc
cctgggcatgaatcttcatccttaactgaagtcttcgaaaatgattttgctgcatcactg
gctctcatggataaaaccaatgatctcgttgattctatccattcaaatatattgagcatt
ccaaatgctgagaatttgaatacaatccctattctagaggatgactttgtggaggatcaa
agtgatagaaatggagtaggtgctattaagtgtagcatggaaactggaacacaagttcaa
acagatggtgtggatgccaatgatttatatacatccttggccactggttctacagaaact
gatgaatttactaatattcaggcttcctttaatggtgacctaccattggaggaaaatgga
aacagcttgctagggcagttaaatgaggatcaaattgttgcttctggcatggattgtgat
gacaaggatgcaaggcctgactgcatatttattgaaaatgctaaagtagattgcttacaa
tctgaagcacttggattagatgaaaaagagagtttgttgaaagatgaagaaatccctgtc
tgtcaggaagctgaactacaaagtacaatgtgccctgaaattaggagtcctttagtagat
cagaatgatgaaaatgacatgattgctaatgacacagggtttttgaatgttggtgatgat
gagataattgaggatgatgatgattatcaatcatgtgctgaaggaactaaccttgaaaat
agcggatggtcttccagaaccagggctgttgccaattatctgcagactgtgtttgataag
gaagatctacatggaagaaaggagttgcatcttaacaatttattagttggtaaaacacgg
aaggaagcatctcggatgttttttgaaactctggttctcaagacaagggattatgtccat
gtagaacagacaaaaccctttgccaatgttagcataaaacctcgaatgaagcttatgaag
tcagatttctga
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