Glycine soja (wild soybean): 114396594
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Entry
114396594 CDS
T06057
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114396594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114396594
Membrane trafficking [BR:
gsj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114396594
Hops complex
114396594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
114396594
NCBI-ProteinID:
XP_028214459
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Position
18:12738622..12747064
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AA seq
843 aa
AA seq
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MANVSVAAEWQLLYNRYYRKPELYPMPWKHVDLARTKVAAAPFGGPIAVIRDDSKIVQLH
AESALRKLRLFSSSGRPLADAVWRHPGGRLVGMSWTDDQTLLCVVQDGTVYRYDVHANLI
EPNLSLGKECFEDNVADCVFWGNGLVCITEANQLFCIADFRNPSAVKLADPEIEEMPHCM
AVIEPQYTVSGNVEVLLGVDDAVVLAVEEDGVQRLGEGVLRGPLQKMVVSRDGKWLASFT
HDGRLLVTTSDLTGVIIERECESALPPQQIAWCGMDAVLLYWDDMLLMMSPEGEPVHYLF
DEPIILIPECDGVRILSNTRMEFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRSSLPEAVEACVDAAGHEFDLSRQQTLLRAASYGQAFCSNFQRDRIQEMCKIL
RVLNAVRSPEIGVPLSIQQYKLLTPSVLIGRLINAHQHLLALKISEYLGMNQEVVIMHWA
CSKITASLAIPDATLLEILLDKLKLCKGISYAAVAAHADKNGRRKLSALLVEHEPRSSKQ
VPLLLSIGEEDIALMKATECGDTDLVYLVLFHIWQKRQPLEFFGTIQARPLARDLFITYA
RFYKHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAHGLFA
ETKEHTFESKAAEEHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIKDWVALEKFSKEKKPPIGYRPFVEACIEADEKGEAIKYIP
KLADPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLSF
QGA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgtccgtcgcggcggagtggcagctcctctacaaccgctactaccgcaag
ccggagctctaccctatgccgtggaagcacgtggacctcgcccgcaccaaggtcgccgcc
gcgcccttcggcggccccatcgccgtcatccgcgacgactccaagatcgtgcagctccac
gctgagtccgccctccgtaagctccgcctcttctcctcctcggggcgccccctcgccgac
gccgtctggcgccaccccggcggccgcctcgtcggaatgtcctggaccgacgaccagact
ctcctatgcgtcgtccaggacggcaccgtctaccgctatgacgtccacgccaacctaatc
gaaccgaacctctccctcgggaaagagtgctttgaagataacgttgcggattgcgtgttt
tgggggaacggtttggtttgcatcaccgaggcgaatcagttgttctgtattgccgatttc
aggaaccctagcgcggtgaagctcgcggatcccgagatcgaggaaatgccgcattgtatg
gccgtgattgagccgcagtacacggtatccgggaatgttgaggttttgctcggcgtggat
gatgctgtggtgcttgctgtggaggaagatggcgtgcagaggctcggggagggagtgctg
agggggccgctgcagaagatggtggtttcgcgcgacggcaagtggctcgcgtcgtttact
cacgacgggaggctcttggtgacgacttcggacttgactggagttatcatcgagagggag
tgtgagtcagctcttcctccgcagcagattgcttggtgtggaatggatgctgtgctgctg
tactgggatgatatgcttttaatgatgagtcctgagggagagccagttcactaccttttt
gatgaaccaataattcttatacctgagtgtgatggagtaaggatattgtccaatactaga
atggaatttctacagcgggtgcctgattccaccgtttcaatcttcacaattggaagtaca
tcacctgctgctttactatatgatgccttggatcattttgatagacgaagtgccaaggca
gatgaaaatttgagattgataagatcatcccttcctgaggctgttgaagcatgtgttgat
gctgcaggtcatgaatttgatctttcacgccagcaaactctcctaagggcagccagttat
gggcaagccttttgtagcaattttcaacgtgatcgtatccaagagatgtgtaaaattctg
cgggtcttgaatgcagtgcgcagccctgagattggcgttcctcttagtattcagcaatac
aagttgcttacaccatctgttctgattggtcgcctgattaatgctcaccaacatctgctt
gcactgaaaatatcagaatatcttggaatgaatcaagaggtggtgataatgcactgggca
tgttcaaagataactgcttcactggcaattcctgatgcgactcttctggagattctgctg
gataagttaaaactgtgcaaaggcatatcctatgcagcagttgctgctcatgcagacaaa
aatggccgacgaaagttatctgccttgcttgttgaacatgagcctcgttcatcgaaacag
gttcctctcctgttaagcattggagaagaagatatagccttgatgaaggcaaccgaatgt
ggtgatacagatcttgtttaccttgtactttttcatatttggcaaaagaggcagccattg
gagttctttggcaccatacaggccagaccattggcacgggacttatttataacttatgca
cggttttataaacatgaatttttgaaggacttcttcttatcaactgggcaactgcaagat
gtggcatttcttctgtggaaagaatcctgggaacttgggaaaaaccccatggcaagcaaa
ggatctccacttcatggtcctcgaataaaacttattgagaaggcacatggtctttttgct
gaaaccaaggagcatacctttgaatcaaaggcagctgaagagcatgcaaaacttttaaga
attcagcacgaacttgaagtgactacaaagcaggctatttttgtggattctagtataagt
gatacaatccgtacttgtattgtcttgggaaatcatcgagctgcaatgaaagtgaaaaca
gaatttaaggtgtctgagaagagatggtattggcttaaagtttttgccttagcaacaatc
aaggattgggttgccttagagaaattttcaaaggagaagaaacctccaattggttataga
ccatttgttgaggcatgcattgaagcggatgaaaagggagaagctattaaatatatccca
aaacttgcagaccctcgagaaagagctgagtcatatgctcgaattggtatggccaaggaa
gctgccgatgctgcttcacaggcaaaagatggtgaattacttggtcggttgaaattgaca
tttgcacaaaatgcagcagcttcatcaatatttgatactcttcgagatcggttgtctttc
caaggtgcttaa
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