KEGG   Glycine soja (wild soybean): 114396594
Entry
114396594         CDS       T06057                                 
Name
(RefSeq) protein VACUOLELESS1-like
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    114396594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gsj04131]
    114396594
Membrane trafficking [BR:gsj04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    114396594
   Hops complex
    114396594
SSDB
Motif
Pfam: Vps16_N Vps16_C
Other DBs
NCBI-GeneID: 114396594
NCBI-ProteinID: XP_028214459
LinkDB
Position
18:12738622..12747064
AA seq 843 aa
MANVSVAAEWQLLYNRYYRKPELYPMPWKHVDLARTKVAAAPFGGPIAVIRDDSKIVQLH
AESALRKLRLFSSSGRPLADAVWRHPGGRLVGMSWTDDQTLLCVVQDGTVYRYDVHANLI
EPNLSLGKECFEDNVADCVFWGNGLVCITEANQLFCIADFRNPSAVKLADPEIEEMPHCM
AVIEPQYTVSGNVEVLLGVDDAVVLAVEEDGVQRLGEGVLRGPLQKMVVSRDGKWLASFT
HDGRLLVTTSDLTGVIIERECESALPPQQIAWCGMDAVLLYWDDMLLMMSPEGEPVHYLF
DEPIILIPECDGVRILSNTRMEFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRSSLPEAVEACVDAAGHEFDLSRQQTLLRAASYGQAFCSNFQRDRIQEMCKIL
RVLNAVRSPEIGVPLSIQQYKLLTPSVLIGRLINAHQHLLALKISEYLGMNQEVVIMHWA
CSKITASLAIPDATLLEILLDKLKLCKGISYAAVAAHADKNGRRKLSALLVEHEPRSSKQ
VPLLLSIGEEDIALMKATECGDTDLVYLVLFHIWQKRQPLEFFGTIQARPLARDLFITYA
RFYKHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAHGLFA
ETKEHTFESKAAEEHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIKDWVALEKFSKEKKPPIGYRPFVEACIEADEKGEAIKYIP
KLADPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLSF
QGA
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggcgaacgtgtccgtcgcggcggagtggcagctcctctacaaccgctactaccgcaag
ccggagctctaccctatgccgtggaagcacgtggacctcgcccgcaccaaggtcgccgcc
gcgcccttcggcggccccatcgccgtcatccgcgacgactccaagatcgtgcagctccac
gctgagtccgccctccgtaagctccgcctcttctcctcctcggggcgccccctcgccgac
gccgtctggcgccaccccggcggccgcctcgtcggaatgtcctggaccgacgaccagact
ctcctatgcgtcgtccaggacggcaccgtctaccgctatgacgtccacgccaacctaatc
gaaccgaacctctccctcgggaaagagtgctttgaagataacgttgcggattgcgtgttt
tgggggaacggtttggtttgcatcaccgaggcgaatcagttgttctgtattgccgatttc
aggaaccctagcgcggtgaagctcgcggatcccgagatcgaggaaatgccgcattgtatg
gccgtgattgagccgcagtacacggtatccgggaatgttgaggttttgctcggcgtggat
gatgctgtggtgcttgctgtggaggaagatggcgtgcagaggctcggggagggagtgctg
agggggccgctgcagaagatggtggtttcgcgcgacggcaagtggctcgcgtcgtttact
cacgacgggaggctcttggtgacgacttcggacttgactggagttatcatcgagagggag
tgtgagtcagctcttcctccgcagcagattgcttggtgtggaatggatgctgtgctgctg
tactgggatgatatgcttttaatgatgagtcctgagggagagccagttcactaccttttt
gatgaaccaataattcttatacctgagtgtgatggagtaaggatattgtccaatactaga
atggaatttctacagcgggtgcctgattccaccgtttcaatcttcacaattggaagtaca
tcacctgctgctttactatatgatgccttggatcattttgatagacgaagtgccaaggca
gatgaaaatttgagattgataagatcatcccttcctgaggctgttgaagcatgtgttgat
gctgcaggtcatgaatttgatctttcacgccagcaaactctcctaagggcagccagttat
gggcaagccttttgtagcaattttcaacgtgatcgtatccaagagatgtgtaaaattctg
cgggtcttgaatgcagtgcgcagccctgagattggcgttcctcttagtattcagcaatac
aagttgcttacaccatctgttctgattggtcgcctgattaatgctcaccaacatctgctt
gcactgaaaatatcagaatatcttggaatgaatcaagaggtggtgataatgcactgggca
tgttcaaagataactgcttcactggcaattcctgatgcgactcttctggagattctgctg
gataagttaaaactgtgcaaaggcatatcctatgcagcagttgctgctcatgcagacaaa
aatggccgacgaaagttatctgccttgcttgttgaacatgagcctcgttcatcgaaacag
gttcctctcctgttaagcattggagaagaagatatagccttgatgaaggcaaccgaatgt
ggtgatacagatcttgtttaccttgtactttttcatatttggcaaaagaggcagccattg
gagttctttggcaccatacaggccagaccattggcacgggacttatttataacttatgca
cggttttataaacatgaatttttgaaggacttcttcttatcaactgggcaactgcaagat
gtggcatttcttctgtggaaagaatcctgggaacttgggaaaaaccccatggcaagcaaa
ggatctccacttcatggtcctcgaataaaacttattgagaaggcacatggtctttttgct
gaaaccaaggagcatacctttgaatcaaaggcagctgaagagcatgcaaaacttttaaga
attcagcacgaacttgaagtgactacaaagcaggctatttttgtggattctagtataagt
gatacaatccgtacttgtattgtcttgggaaatcatcgagctgcaatgaaagtgaaaaca
gaatttaaggtgtctgagaagagatggtattggcttaaagtttttgccttagcaacaatc
aaggattgggttgccttagagaaattttcaaaggagaagaaacctccaattggttataga
ccatttgttgaggcatgcattgaagcggatgaaaagggagaagctattaaatatatccca
aaacttgcagaccctcgagaaagagctgagtcatatgctcgaattggtatggccaaggaa
gctgccgatgctgcttcacaggcaaaagatggtgaattacttggtcggttgaaattgaca
tttgcacaaaatgcagcagcttcatcaatatttgatactcttcgagatcggttgtctttc
caaggtgcttaa

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