Glycine soja (wild soybean): 114396753
Help
Entry
114396753 CDS
T06057
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114396753
Enzymes [BR:
gsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
114396753
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114396753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
DUF6058
Motif
Other DBs
NCBI-GeneID:
114396753
NCBI-ProteinID:
XP_028214696
LinkDB
All DBs
Position
18:7038104..7044542
Genome browser
AA seq
648 aa
AA seq
DB search
MAPARKKPSKPSKSPKNPKKIQPKHDSSSESEEDTPPQQLQPEQLELGDNSDSASELSSV
GDDPLADDFLQGSDDDEEKASGSESGLESGSDSDSDDDDIEKKSRAIDEEKAREEEDADA
EMQLNINQESDEFRLPTKEELEDEALRPPDLSNLQRRIKEIVRVLSNFKALRQDGSTRKE
YVEQLKKDLCTYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPMCLRTNTLKTRRRDLA
DVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEK
ERVIDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTGNLHRMGVSNTVVCNYDGK
ELPKVLGVNVVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVD
ANSKSGGYIVYSTCSIMVAEVRFSVESIKLICSFCFFICHMFLNFLSLNILQNEAVIDYA
LKKRDVKLVPCGLDFGRPGFTRFREQRFHPSLEKTRRFYPHVQNMDGFFVAKLKKMSSSK
PGAKSSETAEKEEDTTTFVEEKEKSSYGIKENGNVSSESESKNGKKRKFPSKPSNGLKEK
GKESSESEPKKRNKRLFPSKEEISKAREEKRNALREKNRKGSKRQKKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcaaggaagaaaccttctaagccaagcaaatctcctaagaaccctaagaag
atccaacccaagcacgattccagctccgaatccgaagaagacacgccgccgcagcaactg
caaccggagcaactcgaactaggcgacaactccgattccgcgtcggagctctcttctgtc
ggtgacgatcctttagccgacgatttcctccaaggaagcgatgacgacgaagagaaagcc
tcaggttcggagtcaggtttggagtcaggttcggattccgattcggatgacgatgacatt
gaaaagaagtcgagagctattgatgaagagaaggcgagagaggaagaggatgcggatgcc
gaaatgcagctcaacatcaaccaagagtctgatgagttcagattgcctaccaaagaggag
cttgaggatgaggctctccgcccacctgatctttccaatctccagaggagaatcaaagag
attgttcgtgttctttcaaattttaaggctttgaggcaagatgggtcaacaagaaaggag
tatgttgaacagcttaagaaagatttatgtacgtactatggctacaatgagtttctaatt
ggtgctctagtggagatgtttccagttgttgaactcatggaactgattgaagcctttgaa
aagccacgccctatgtgtctaaggactaatacattgaagacacgcagacgggatttggcg
gatgttttgataaataggggagtaaatttggatcctttaagcaagtggtcaaaggttgga
cttgttgtgtatgattctcaagtgcctattggtgccactccggagtatatggctggtttc
tacatgctgcaaagtgcaagctcttttctgcctgttatggctttggctcctcaagagaag
gaacgtgtcattgatatggcagctgcacctggtggtaaaacaacttacattgctgctcta
atgaagaatactggaataatatttgcaaatgaaatgaaggtaccaaggctcaagtcattg
actggaaatttgcatcgcatgggtgtatctaatactgtagtgtgtaactatgatggaaag
gagcttccgaaggttttaggtgtcaatgttgttgatagagtattattggatgctccttgc
agtggaactggggttatatccaaagatgagtcagttaaaacctctaaaagtctggaagat
atacagaaatgtgcgcatctacaaaaggagctcattcttgcagcaattgacatggtggat
gctaattcaaaatctgggggatatattgtttattctacatgctcaattatggttgccgag
gttcgtttttcagttgaatctattaagttgatatgctctttttgcttttttatttgtcat
atgtttctaaattttctttcattaaatattcttcagaatgaagcagttattgactatgca
ctcaaaaagcgggatgttaaactggttccttgtggacttgattttgggcgtccaggattt
acaaggtttagggaacaacgttttcacccttctttagaaaagacaaggcgtttctatcct
cacgtacagaatatggatggtttttttgtggcaaagttgaaaaaaatgagcagctcaaaa
cctggggcaaaatcatcagagacagccgagaaggaagaagacactaccacgttcgtggag
gaaaaggagaaatcaagttatggcataaaagaaaatggcaatgtatcttctgaatccgaa
tccaaaaacgggaagaaaagaaaattcccctcgaaaccaagtaatggtctaaaagaaaag
ggcaaagaatcttctgaatctgaacccaaaaagaggaataaaaggctatttccatctaag
gaagagatttcaaaagccagggaggagaaaagaaatgctttaagagaaaaaaacagaaaa
ggtagcaaacgacagaagaaaaaatga
DBGET
integrated database retrieval system
