Glycine soja (wild soybean): 114396802
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Entry
114396802 CDS
T06057
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114396802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114396802
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114396802
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
114396802
NCBI-ProteinID:
XP_028214772
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Position
18:9229542..9238814
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AA seq
325 aa
AA seq
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MSNLPQSLSMGAAFGGGGAPTPSSSGGAGAQGSGAGKDRKMASAEQLVLELSNPELRENA
LLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQ
CVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFL
LSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVA
ALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQ
LLHNVGVNRVPALQAGGGFDHMIVT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttgccccaatcgctgtcgatgggcgcggccttcggcggcggtggcgctcca
acgccgtcttccagtggcggcgccggagcacagggctccggcgctggcaaggatcggaag
atggcgtccgcggagcagctcgtgctcgaactcagcaaccctgaactccgtgaaaacgcg
cttctcgaactctccaagaagagggagctatttcaagatcttgctccgttgctatggaat
tcttttggtactattgctgcacttttgcaggaaatagtttcaatataccctgttctttca
ccaccaaatcttactcctgcacaatcgaaccgagtatgcaatgctcttgctcttcttcag
tgtgtagcatctcaccctgatacaaggatgctattcctcaatgctcatatacctctatat
ctgtatcccttccttaatacaacaagcaagtcaagaccatttgagtacttgaggcttacc
agccttggtgtcattggtgcattggtgaaggttgatgatacagaagttataagtttcctt
ctttcaacagagataattcctctatgcttgcgaaccatggaaatgggcagtgagctatcc
aaaacagttgcaacatttattgttcaaaaaattctgttggacgatgtgggcttggactac
atttgtactacagcggagcgcttttttgcggtaggtcgagttctggggaacatggtggca
gctctagctgagcaaccttcatctcgtctattgaagcatatcattcgatgctatcttcgc
ctgtcagataatccaagggcttgtgatgcattaagaagctgtctgccagacatgttaaga
gatgctactttcagcacttgccttcgtgaagaccccacaactaggaggtggctacaacaa
ttgcttcacaatgttggagtgaatcgggttcctgcactacaagctggaggaggtttcgat
cacatgattgtgacctga
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