Glycine soja (wild soybean): 114397551
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Entry
114397551 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114397551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114397551
03009 Ribosome biogenesis [BR:
gsj03009
]
114397551
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114397551
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114397551
Complex B
114397551
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114397551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRAI
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
114397551
NCBI-ProteinID:
XP_028215437
LinkDB
All DBs
Position
18:complement(4523261..4533048)
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AA seq
570 aa
AA seq
DB search
MSYVPPHLRNATSTSVATARTPSVTLDNNNNNHHHHHKLAFPSNTTTTNCSPSLSFHNNA
SRRSSAAPPSPRILATPDAVFPQWQPSERVSRMTPEQIEEIRSRLNLDVAVASDSPPAPA
PAPIESFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT
IPMIQHCLAQPPIRRNDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGGTNIE
KQRFELRAGVEIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMRN
LPEKHQTLLFSATMPVEIEELSKEYLANPVQVKVGKVSSPTTNVSQTLVKISENEKIDRL
LDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGRSQSEREAA
LHDFRSGTTNILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLATS
FYTDRDMFLMANIRKAIADAESGNTLTFATGKVARRKEKEAAAAQKEANIALSKQLGLGA
ASMNIEDKYKFMITATNTKREGAADSAWDD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccgcacctcagaaacgccacctccacctccgtcgccaccgccaga
accccctccgtaacccttgacaacaacaacaacaaccaccaccaccaccacaagctcgca
ttcccctccaacaccaccaccaccaattgctctccctctctctccttccacaacaatgcc
tctcgccggagctccgccgcgcctccctcgccgcggattcttgccacccccgacgccgtc
ttcccccaatggcaaccctccgaacgcgtttctcgcatgactcccgagcagattgaagaa
atccgatccaggcttaatcttgatgttgctgtcgcatctgactctcctcctgcacctgcg
cctgctccaatagaatcgtttactgatatgtgtttgcatccgagtatcatgaaggacatt
gcttaccatgaatacaccaggccaacttcgatccaggcacaggccatgccaattgctctc
agtggaagggatctattgggttgtgctgaaactggtagcggaaagactgcagctttcaca
attcctatgatacagcattgcctggcccaacctccaattcggcgcaatgatggtcccctg
gcattagttttggctcctaccagagaacttgctcaacaaatagaaaaagaggttaaagct
tttagcagatctctcgagtcattaaaaactgccatagttgtgggcggaactaacattgaa
aagcagaggtttgaactaagagccggagttgaaatagctgtggccacccctggaagattc
attgatcacttacaacaaggcaacacttccctctctagaatttcttttgttgttctggac
gaggcagatagaatgcttgatatgggttttgaaccacagataagggaggtaatgagaaat
cttccagagaagcatcaaacactgctgtttagtgcgactatgcctgtggagattgaagaa
ttatcaaaggagtacttggctaaccctgtgcaagtgaaggtggggaaagtgagtagccca
acaactaatgtttcacaaactcttgtgaaaatttctgaaaatgagaagattgatcggctt
ctagatttgcttgtagaggaggcatcacaggctgaaaaatgtggccatccatttccatta
acaattgtgtttgttgagaggaagacaaggtgtgatgaagttgctgaagcgttggtagct
caaggattatctgcagtttctcttcatggtggtcgcagtcagagtgaaagagaagctgcc
ttgcatgattttcggagtggcaccaccaacattttggttgccactgatgtcgcatctcgt
ggcttggatgtcacaggagtgtcacatgtcatcaatctagatcttccaaagaccatggaa
gattatgtacaccggattggaaggacagggcgtgcgggatcaactggcttagctacttca
ttttacaccgatcgtgacatgttcctcatggcaaatataaggaaagcaatagctgatgct
gaatctgggaacacactgacatttgcaactggaaaggttgctagaaggaaggagaaagaa
gcagcagctgcacaaaaagaggcaaacattgctttatccaaacagttaggattgggagct
gcttcaatgaacattgaagataaatataaattcatgattactgccacaaacactaaaaga
gagggagcagcagatagtgcctgggatgattaa
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