Glycine soja (wild soybean): 114397682
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Entry
114397682 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114397682
03015 mRNA surveillance pathway
114397682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114397682
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114397682
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114397682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
114397682
NCBI-ProteinID:
XP_028215655
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All DBs
Position
18:complement(33180608..33185046)
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AA seq
488 aa
AA seq
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MAEPSSTAATIATADPPVPATKSWADEADEETNASTAEAETSSVNLEALTIDDKEKNSSK
LLDDPDDSNIQAVTSGDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMIL
SPPNRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCICPTRELAIQNIEVLRRMGK
YTGIASECLVPLDRDAVHVSKRAPIMAQVVIGTPGTVKKFISFKKLGTTRLRILVFDEAD
QMLAEDGFRDDSLRIMKDIEKENSKCQVLLFSATFNDTVKNFVSRTVRMDHNKLFVKKEE
LSLDAVKQYKVYCPDELAKIDVVKDYIFEIGENVGQTIIFVRSKITARLTHEALVKLGYE
VTSIQGSLSNEERDKVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYDLPKKYGVRDE
PDYEVYLHRVGRAGRFGRKGAVFNLICGELDERLMSKIENHFGTRVTEVRAQSVEEYKAA
LKEAGLLQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccgtcgtccaccgccgccaccatcgctaccgctgatcctccggttccagcg
accaaaagctgggccgacgaagcggacgaagaaaccaacgcctccaccgccgaggcagaa
acctcctccgttaacctggaagcgttaaccatcgacgacaaagaaaagaactcttcaaaa
ctcttggacgaccccgacgattctaatattcaagcggttacttctggcgatacgccgtac
acgtcggcagcgaggttcgaggacctaagcctctcgccagagcttttgaaggggctctat
gtggagatgaagtttgagaagccgagcaagatccaggctatcagtttgccgatgatcctt
agcccgcccaatcgggacctgattgcgcaggcacacaatggctctggcaagacgacttgc
ttcgtgcttgggatgcttagccgtgtcgatccaaaggtgcaggctccacaggcgctctgc
atctgccccacccgggagctggccattcagaacatcgaggtgctccgcaggatggggaag
tacacggggattgcatccgagtgccttgtgccattggaccgggatgcggttcatgtatcg
aaaagggcacctattatggcacaggtggtgattgggaccccagggacagtcaagaagttt
attagcttcaagaaacttgggaccacgaggttgaggattcttgttttcgatgaggctgat
caaatgcttgctgaggatggatttagagatgattccctgaggataatgaaagatatagaa
aaagagaattctaagtgtcaggttcttttgttttctgctacatttaatgacaccgtcaag
aatttcgtttcaaggacagtcaggatggatcataataaactctttgtaaagaaagaagaa
ctatctttagatgcagtgaagcaatataaagtgtattgtcctgatgaacttgctaagatt
gatgtggtaaaagattacatatttgaaataggagagaatgtggggcaaacaattatattt
gtgcgctcaaaaattactgcaagattaacacatgaagcacttgttaagttgggctatgag
gttacatctatacaaggttctcttagtaatgaagagagagacaaagttgtcaaggagttc
aaagatggtttgacccaagttcttatatcaacagatattcttgctcgtggctttgatcag
caacaggttaatttggtcatcaattatgatcttcccaagaaatacggtgtacgtgatgag
ccagattatgaagtgtatttgcacagggttggcagagctgggcgttttgggcgcaagggg
gctgtatttaacctgatatgtggtgaattggatgaaaggctcatgtcgaagatcgagaac
cattttggcactcgtgtaactgaggtgcgagcacaaagtgttgaagaatataaagctgct
ctcaaggaagccggtttactgcaatga
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