Glycine soja (wild soybean): 114397730
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Entry
114397730 CDS
T06057
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114397730
09122 Translation
03013 Nucleocytoplasmic transport
114397730
03015 mRNA surveillance pathway
114397730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114397730
03041 Spliceosome [BR:
gsj03041
]
114397730
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114397730
Spliceosome [BR:
gsj03041
]
Complex C
Other components
EJC/TREX
114397730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
114397730
NCBI-ProteinID:
XP_028215714
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Position
18:1510903..1514850
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AA seq
708 aa
AA seq
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MSSKYQILDNRPINQWKVTELKDELKRRKLSIKGLKDDLVKRLDEVLRLEREADEASEKD
EANGFDGHVDGEKDSEAVTVDAEMVDSTDRDNAKTFETAEKGKSGVVDPVEIENVEKIPE
VVDHDSNKNDKQDGVTNQVDINNSVSAIDQEVEPKGLPAGGDSANVGQEAIAHGSTVEKT
TITVNESVVTEVVASAEDSYRAEKNNEDSAAKLENEESKAQLDGEDSKPQLDCDIKPLHE
DPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKP
EMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENFNNVLSPDMNKTNSSDDVGYPEE
LNLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKIEIEEPIVKEESSTIAVGDGLSAGES
DIHQDIDISPVAPTEKRKFNEQASVGNNEPAKRQRRWNTETVKGPDAQSTTPRPATTPRD
EPIALKRNFSRSDSSATDDTPKERIVPPPQRSPTNSLRIDRFLRPFTLKAVQELLGKTGN
VSSFWMDQIKTHCYVTYSSVDEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPP
PTQAASVSTVPAVPPAPPSQPEPSPRLHREPHPVPATLPPPPPLSKPPPVARERLPSPPP
LPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVASKLTAQGKSARQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaaatatcagattcttgacaaccgccctattaatcagtggaaggttacagag
ctaaaagatgagctgaagaggaggaagttaagtatcaagggtttgaaggatgatttggtc
aagcgtttggatgaagtccttcgtcttgaaagggaggctgacgaggcttctgagaaggat
gaggccaatggtttcgatggtcatgtagatggggaaaaagattcagaggcggttactgtg
gatgctgaaatggttgattcaactgacagggacaatgccaaaacatttgagactgctgaa
aagggcaagagcggtgtagttgatcctgttgaaatagaaaatgtggaaaagattccggag
gttgtggatcacgacagcaataagaatgacaagcaggatggtgttaccaaccaagttgac
attaataatagtgtgtcagccatagatcaagaggttgaacctaagggcttgccagctggt
ggagattctgcaaatgtgggacaggaggcaattgcccatggttctactgtggagaagact
accattacagttaatgagagtgtagtaacagaagtagtggccagtgctgaggattcttat
cgtgcagaaaagaataatgaggattcagcagcaaagctggagaatgaggagtcaaaggcg
cagctggatggtgaggactcaaagccccagctggattgtgacatcaagcccttgcatgag
gatcctgtgcccgactcttctgttccagaaaaccaggtatctgaggtcaaccctagttta
gggtctcaagtaaaatctgattctatttctactgattctctgtcaattaatcaaaagaat
gaactaaaggatactataattactgataatgtcaaattagaacaagatattgttaagcca
gagatggtggaagaaccatcatccagaaatgatgtacctgtttcttatgatgaatcacat
tcaatggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaatttcaataat
gttttaagtccagacatgaacaagaccaatagcagcgatgatgtggggtatcccgaagag
ttgaacttggacagaagttctggtgatgattctatggaagaggatttgcctgagactaag
caaattgattctaagtttaatgttgatgaacttaaagacaaaatagagattgaagagcct
attgtgaaggaggaaagtagtactatagctgttggagatggtctgtctgcaggagaaagt
gatatccaccaagatattgacattagtccagttgctccaacagagaaacgaaaatttaat
gaacaagcatcagttgggaacaatgagcctgcaaaaaggcaacgcaggtggaacactgaa
acagttaaaggtccagatgcacaaagcactactcccaggcctgctactacacctagagat
gagccaattgctttgaaacgcaacttctctaggtctgattcctctgcaactgatgataca
cctaaagaacgcattgttccaccaccacaaaggtccccaactaattccctcaggattgat
cgttttctccgtccatttaccctaaaagcagtgcaagaacttcttggtaagactgggaat
gtcagcagcttctggatggaccaaataaagacccattgctatgtgacttactcgtctgtg
gatgaagccattgagacacggaatgctgtatataatttgcaatggccaccaaatggtggg
cgtctcttagttgctgagtatgttgatcctgaagaagtgaaaatgaagttagaacctcct
cctactcaggctgcatctgtcagcactgtcccagcagttcctcctgcacctccctcacag
ccagagccttcccctcgtctgcacagggagccgcatccagttccagctactctcccacct
ccaccaccattgtcaaaacccccaccagtagcaagagaacggcttccatctccaccaccc
cttcctgagaaagttgacccacccattgtcactctggatgatctctttcgcaaaaccaca
gccactcctcggatctactatctacctttgtctgaagagcaagttgcctcaaaacttaca
gcacagggtaaaagcgcgaggcagtag
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