Glycine soja (wild soybean): 114397937
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Entry
114397937 CDS
T06057
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114397937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114397937
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114397937
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
114397937
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-Di19
Motif
Other DBs
NCBI-GeneID:
114397937
NCBI-ProteinID:
XP_028215809
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Position
19:40909233..40913779
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AA seq
368 aa
AA seq
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MVNTAKRNFFVYLKFSRNAKAVKFAVNLVTIACEYVACHKSRSSGSLSSGKKYCRSGLAM
APGSSVFKEVLESHLMSSDYETGKAKSEAKSNITSTKSSVGLSGKSGISSNNGVYELLGC
PVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALEKVAESLELPCRY
QSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSECSVMGDIPTLVAHLKDDHKVDMHDGC
TFNHRYVKANPHEVENATWMLTVFNSFGRHFCLHFEAFQLGSAPVYMAFLRFMGDDNEAK
KFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRI
TGRIWREE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatactgctaaaagaaacttttttgtttacttgaagttttccagaaatgctaaa
gcagtcaaatttgcagttaatctagttactattgcatgtgaatatgtagcatgccataaa
agcaggagctctggttccttgtcatccggaaagaaatactgtagatctgggttagcaatg
gctcctggaagcagtgttttcaaagaagttcttgaatctcacctgatgtcttcagattac
gaaacggggaaagctaaatctgaggccaagagtaacattacatccacaaaatctagcgtt
gggttgagtggaaagagtggaattagttcaaacaatggggtgtatgaattacttggatgc
cctgtttgcaagaatttgatgtatcccccaattcaccagtgcccaaatggccatacatta
tgttcccattgtaaagttgaagtccataatatctgcccatcctgccatcatgatcttggg
aatataaggtgtttagctttggagaaagtggcagaatcattggagcttccttgcagatat
cagagtcttggttgtcatgatatattcccgtactatactaagctgaagcatgagcaaaat
tgcggatttcgtccatacaattgtccctatgctggatctgagtgctctgtgatgggtgac
atccctactcttgttgctcatctcaaggatgatcacaaggttgacatgcatgatggatgt
accttcaatcaccgatatgtcaaagcaaatccacatgaagttgaaaatgccacatggatg
ctaactgtttttaatagttttggaaggcatttctgcttgcactttgaggcgttccagctt
ggctcagctccagtgtatatggcatttttgcgattcatgggtgatgacaatgaagcaaag
aaattcagctacagcttggaggttggtgcaaatgggcgcaagcttatatggcaaggaatt
ccaaggagcattcgggacagtcatagaaaagttcgagatagtcaagatgggcttataatt
cagaggaacctagccctttatttttctggtggagaaagacaagagttgaagttaagaatc
actggtcgtatatggagagaagaatga
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