Glycine soja (wild soybean): 114397999
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Entry
114397999 CDS
T06057
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114397999
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114397999
REST complex
114397999
Heterochromatin formation proteins
Other heterochromatin formation proteins
114397999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114397999
NCBI-ProteinID:
XP_028215902
LinkDB
All DBs
Position
19:complement(1664538..1674735)
Genome browser
AA seq
1402 aa
AA seq
DB search
MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGGGGGSGNGGGVGGGANASQ
KLTTNDALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIKRVKELFKGHNNLI
FGFNTFLPKGYEITLDEDEAPPKKTVEFEEAISFVNKIKKRFLSDEHVYKSFLDILNMYR
KEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPYIRNSLQRFNERGSMA
PMIRQMPADKAQRYRRDRLPSHDRDMSAERPELDDDKTMMNIHKEQRKRESRERRMRDQD
EREHDLDNNRDLNLQRFPDKKKSVKKAEGFGMASDFASYEDKDTLNSPGMYSQAFSFCEK
VKGKLSSSDDYQTFLKCLHIFSNGIIKRNDLQNLVTDLLGKHSDLMDEFNDFLERCENID
GFLAGVMSKKSLSTDAHLSRSSKLEEKDKEHKRDLDGAKEKERYREKYMGKSIQELDLSD
CKRCTPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLF
RCEDDRYELDMLLESVSSAAKKAEELYNSINENKISVETLNRIEDHFTVLNLRCIERLYG
DHGLDVIDILRKNPTHALPVILTRLKQKQEEWSKCRSDFNKVWAEIYAKNHYKSLDHRSF
YFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGIHED
LYKLVRYSCEELFSSKELLNKIMRLWSTFLEPMLGVPSQSHGTERAEDRKTGHNVCNFGA
PNVGGDGSPREDTLSINSRVPKSDKNEADGRVTEVKNVHWTTVAASNDKENGSVGGEIVS
RDDPLMDKGQKNVECNDKASGFSKQFASGEEGAKNNVSIAIRGENSLNRTNLDASSGCAL
TPSQPTDVDDSVSKSQGVNVPSVEGCDMATPVPVVNGVLSESSKVKTHDESAGPCKIEKE
EGELSPIGDSEEDNYVAYGDSNVQSMAKSKHNVEKRKYQSRNGEDESCPEAGGDNDADAD
DEDSENVSEAGEDVSGSESAGDECFREDHEEEEDIEHDDVDGKAESEGEAEGICDAQVGG
DGTSLPLSERFLSSVKPLTKHVSAVSFVEEMKDSRVFYGNDDFYVLFRLHQALYERILSA
KTHSMSAEMKWKAKDASSPDPYSRFMNALYNLLDGSAENAKFEDECRAIIGNQSYVLFTL
DKLIYKLVRQLQTVATDEVDNKLLQLYEYEKSRKSGKLNDSVYHANAHVILHEDNIYRLQ
CSSTPSRLFIQLMDNMNEKPELFAVSIDPNFSFYLHSDFLSVFPNKKEPHGIILHRNKRQ
YGNLDELSAICSAMEGVKVVNGLECKIACSSSKISYVLDTQDFFFRPRKKRRTPSGTTTS
QSRRDREERFRKLLAHSQFVSS
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggcgagggatgatatgtatcctgcctctcaattcaaacgcccctttgcttcg
tcacgtgctgattcctatggacaaaaccaagtccctggaagtggaggaggagggggaggc
ggcggcggagggggaagtggcaatggaggtggtgttggcgggggagcaaatgcttcccag
aagctgactaccaatgatgctttatcctatttgaaggaagtcaaagacatgtttcaggac
caaagagagaagtacgacatgtttcttgaggtcatgaaagatttcaaggcccaacggact
gacactgctggtgtcataaaaagggtgaaggagttattcaaggggcacaacaatttgatt
tttggatttaatactttcctaccaaagggttatgagataacgcttgacgaggatgaggct
cctccaaagaaaactgttgaatttgaagaagcaatcagctttgtgaacaagataaagaaa
cgattcctaagtgatgagcatgtttacaaatcattcttggacattttaaatatgtaccgc
aaagagcataaggacattggtgaggtttatagtgaggttgctaccctttttaaggaccat
cgagatttgctcgaggagttcactagattcttaccagatacttctgctgcaccttccaca
cagcatgctccatatattcgaaattcattgcagcgctttaatgagcggggttctatggcc
cctatgatccgccaaatgccagcagacaaggcacaacgctatcgacgagacaggcttcct
tctcatgatcgtgatatgagtgctgaacgccctgagctggatgatgacaagacaatgatg
aacatacacaaggagcagaggaagcgtgaaagtagggagaggagaatgcgtgatcaagat
gagagagaacatgatcttgataacaacagggatttgaacttgcaacgctttcctgacaaa
aaaaaatctgtcaagaaagctgaaggttttggaatggcttctgactttgcttcttatgaa
gacaaagataccttaaatagcccaggcatgtatagtcaagcattcagtttctgtgagaaa
gttaaggggaagttgagcagttcagatgattaccaaacattcttgaagtgccttcatatt
ttcagcaatggaataattaaaaggaatgatttgcaaaatttggtaactgatttacttgga
aagcattcggatcttatggatgaattcaatgatttcttggagcgttgtgaaaatattgat
ggattccttgctggtgtcatgagtaaaaagtcactgtctactgatgctcatttatcaaga
tcatcaaagttggaggaaaaagacaaagagcacaagcgtgatttggatggagctaaagag
aaggaaagatacagggagaaatacatgggaaaatccattcaagaacttgaccttagtgac
tgtaaacgttgtactcccagctaccggcttctgcctgcagattatccaattcctacagct
agtcagagatctgagcttggtgctcaagtcttgaatgaccattgggtatctgtgacttct
ggaagtgaggattactctttcaaacatatgcgcagaaatcagtatgaagaaagcttgttc
agatgtgaagatgacagatatgagctggacatgttattggagtctgtgagctcagctgct
aaaaaagcagaggaattgtataatagcatcaatgaaaataaaatcagtgtggagactctg
aaccgtattgaagatcactttactgttctaaatttaaggtgtattgaacgtctatatggt
gatcatggtctggacgttatagacatcttgcgtaaaaacccaacccatgccctgcctgta
atattgactcgactgaagcagaagcaagaggagtggagtaagtgtcgttcagatttcaat
aaagtatgggctgagatttatgctaaaaatcactacaaatcacttgatcatcgtagcttc
tacttcaaacagcaagattcaaagaacttgagcaccaaatctttggttactgagattaaa
gaaattaaagaaaagcagcagaaagaggacgatattattcagtctattgcagctggaaat
aaacagcctctaattccacatctggaatttgaatattctgatgttgggattcatgaagac
ctgtataaacttgttcgttattcatgtgaagagttattctctagtaaagagttgttaaat
aaaattatgaggctctggagtaccttcttggagcctatgcttggtgttccttcccaatct
catgggacagaaagggctgaggacagaaaaactggacataatgtttgcaattttggtgca
ccaaatgtagggggtgatggaagtccccgggaagatactctttcgataaattcaagggta
ccaaaatctgataagaatgaagctgatggtagagtaactgaagtgaagaatgttcactgg
actactgtggcggcatccaatgataaagaaaatgggtctgttggtggtgaaattgttagt
agagatgatccattaatggataaaggacagaaaaatgtagaatgcaatgataaagcctct
ggatttagcaaacaatttgcctctggtgaagaaggagctaaaaacaatgtatcaattgca
attagaggagaaaacagcctgaacagaactaacttagatgcgtcttcaggctgtgctctt
actccatcgcaacctactgatgttgatgactctgtatccaagtctcagggtgttaatgta
ccttcggtggagggatgcgacatggcaactccagtaccagtggtcaatggtgttctaagt
gagagcagtaaagttaaaactcatgatgaatcagctgggccctgcaaaattgaaaaggaa
gagggtgaattatcaccaattggtgactctgaggaggataactatgttgcttatggagat
tcaaatgtgcagtcaatggctaagtcaaagcacaacgttgaaaaaaggaaatatcagtct
agaaatggagaggatgaatcttgtcccgaggctggaggtgacaatgatgcagatgctgat
gatgaggacagtgaaaatgtttctgaagctggtgaagatgtctcaggcagtgaatctgct
ggtgatgaatgcttccgcgaagatcatgaagaggaggaagatatagaacatgacgatgtt
gatggtaaggctgagagtgaaggtgaagctgaggggatttgtgatgcacaggtcggagga
gatggcacatctttgccattgtcagagaggttcctttcatccgtgaaacccctcacaaag
catgtatcagcagtttcatttgttgaagaaatgaaggattcaagggtgttctatggaaat
gatgacttctatgtgctttttagacttcatcaagctctttatgagaggatcttatcagca
aaaacacattcaatgagtgcagaaatgaaatggaaagcaaaagatgctagttcaccagat
ccttattcaagatttatgaatgcattgtacaacttgcttgatggatctgccgaaaatgcc
aagtttgaagatgaatgccgagcaattattgggaaccagtcgtatgtgttattcacattg
gacaagttaatatacaaattggtcagacagcttcaaactgttgcaaccgatgaggtagac
aataagcttctccaattatatgaatatgaaaagtctcggaagtctgggaagttaaatgat
tctgtatatcatgcaaatgctcatgtcatccttcatgaggataatatatatcgtttacaa
tgttcctctaccccctcgcgactattcatccagctcatggacaatatgaatgaaaagcct
gagttgtttgctgtttctattgatccaaatttctctttttatctgcacagtgattttctg
tctgtctttcctaacaaaaaggagccccatggcatcatactgcatagaaacaaacgccaa
tatggaaacttagatgagctttctgcaatatgctctgccatggaaggtgttaaagtagtt
aacggattggaatgtaagatagcttgcagctcatccaagatttcatatgttcttgacaca
caagattttttcttccgaccaagaaagaaacgacggacgccatcagggaccacaacctcc
cagtctcgtagggacagagaggaaagattccgcaaattgttggcacactcgcaatttgta
tcttcatga
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