Glycine soja (wild soybean): 114398135
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Entry
114398135 CDS
T06057
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114398135
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114398135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
114398135
NCBI-ProteinID:
XP_028216092
LinkDB
All DBs
Position
19:complement(3607345..3622238)
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AA seq
1806 aa
AA seq
DB search
MSFPATSGAAALASSGHRGIGLSNTVHSELASCLPLPSLPVFCGASDQDLRLVDSPARLN
RVDVLAQSAKIAELLRHTDVSYLNLRDEAKGVPYIYVEPLELHDEVLRCNPEAFEYSTAG
HVKEQISGSAAVPEKRQSESSFPIQSQTQKDYNAIHSRQLDNFSTNDISSLSSKKLKVKK
KGGDGISLAPDSAELQGTYIERFREFLEDLCNNAEFHSDDRDEAEWLPLPLTDLRLLVNE
ITSIREKKLLHLVPVEVLVRLLKVLDHQIHRAEGLSIEECDNSDSELVSSVLIALESIHA
ALAVMAHTDMPKQLYNEEIIERILEFSRRQIMDVMCACDPSYRALHRPSENTAFEVDDYE
DNDAEFGSASKKRRTSKTSKLKKSASSRLSTAVNTILQKLCTVLGLLKDLLLIERLSDSC
ILQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYTQHRNYVIDEVVQLLWKLPYSKRAL
RSYHVREEEQRQIQMVTALLIQLIHCSANLPDALRMASNGNAVLEASVDVSYPIKCHEAA
TESCCLFWSRVLQRFASVKTHDASELKSIIENLVTDLLTTLNLPEYPASAPILEVLCVLL
LQNAGPKSKDVSARSLAIDILGTIAARLKRDALVCSQENFWILQDLLSQDAAAQHHPKDT
CCVCLGGRVENLFICHGCQRLFHADCLGIKEHEVSSRKWSCQTCICHKQLLVLQSCCNSQ
QKNDVKKNHDTDSEVSKQEIVQQLLLNYLQDVTSADDLHLFICWFYLCLWYKDDSNCQQK
SSYYLARMKSKIIVRDSSTVSSILTRDSVKKITSALGQNSSFCRGFDKILHTLLASLREN
SPVIRAKALKAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPG
VGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSNANFSGFTRACTEIISRVSDDEASIQ
DLVCKTFSEFWFEEPPASQTQVFGDGSTVPLDIVKKTEQIVEMLRGMPNNQLLVTVIKRN
LSLDFLPQSAKAVGVNPVSLAIVRKRCELMCKCLLEKMLQVDEMNNDGVEVGALPYVLVL
HAFCLVDPTLCAPASNPSQFVVTLQPYLKSQVDNRTVAQLLESILFIIDAVLPMLGKLPP
SIVGELEQDLKQMIVRHSFLTVVHACIKCLCSVSKMSGKGAAVVEQLIQFFFKCLDTQAV
DNKQKVGRSLFCLGLLIRYGNRLLASSSNKLIDVGSSVKLFMKYLCVEDFVVKVRSLQAL
GFVLIARPEYMLENDVGKVLEETLSSASDTRLKIQGLQNMFEYLLDAESQMGTDKDNENV
AGYSVGAGKSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFSEHVRQSALKIVEVVLRQG
LVHPITCVPYLIALETDPLESNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQSIC
GSSENVDHKIQSKTSTSGKGKPEAGSLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVRKFD
NPRWNKLLIAFLIYCTEVLALLPFISPDEPLYLIYAINRVVQVRAGPLEANFKAWTSSIS
RHCTPHGNGMYQQGTDEPTVASQVMPLDLNGTFQQNVDLQPNMNDMRTLDLNGSNHQLTD
YPLSYNGSSEANLHSVGYTDPFSFAKDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDD
ARCQAYSPTEQPKPGEVISRQNIAFNIGDSQFSLPTSPQELIQRYQEFKHALREDTVDYS
HYTANIKRKRPTTTPRRVQVRKPVYVAGGYDNGDDDEDYTGGSATRKISFSGRRSSLKNS
RQYGLM
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccctgccacctccggcgccgccgcgctggcgtcttccggccaccgcggtatc
ggtctctccaacaccgtccactccgagctcgcctcgtgcctcccgctgccgtccctcccg
gtcttctgcggcgcctccgatcaggacctccgcctcgtcgactcgccggcgcgcctcaac
cgcgtcgacgtactcgcgcagtccgccaagatcgccgagctgctccgccacaccgatgtg
tcatacttgaatttaagagatgaagccaaaggtgttccctatatatatgttgagccttta
gaactccatgatgaagttctcaggtgcaatcctgaagcatttgaatacagcactgcaggt
catgtcaaggagcagatctctggtagtgccgcagtacctgaaaaaaggcaatcagaatca
agttttcctatccaaagtcagactcaaaaagactataatgcaatacatagtcgccagctt
gataatttttccacaaatgatatctcttcgttgtcttctaaaaaattaaaagtaaaaaag
aaaggtggtgatggaatatccttagcacctgattctgctgagcttcaaggtacctacatt
gaaaggtttcgtgagtttttggaggacttgtgcaacaatgctgaatttcatagtgatgat
cgagatgaagcagaatggttgccattgcctcttacagatcttagattacttgtcaatgag
ataacatctattcgtgaaaagaaacttctgcatttggttcctgtagaagtccttgttaga
ctattaaaggttctagatcatcagatacatagagcagaaggcctgtcaattgaggaatgc
gataattcagattcagaattagtttcatctgttttaattgcattggagtccattcatgct
gcactagcagtgatggctcacactgatatgccaaagcaactctataacgaagagatcatt
gagcgaattctggagttttccaggcgtcaaataatggatgttatgtgtgcatgtgatcca
tcataccgtgcgttacatagacctagtgagaacactgcatttgaagttgatgattatgaa
gataatgatgctgaatttggttcagccagcaagaaacggcgaactagcaagacttcgaag
ttgaagaaatcagcatcaagcaggctctctactgctgtaaatactattcttcagaagttg
tgcactgttcttgggctactcaaagatttgttgttaatagagaggttatcagatagttgc
atactacaacttgtaaaaacaagcattacaacatttttggttgataatatccagcttttg
caattgaaggcaatcagtttactcagtgcgatattctatttatacacacaacatcgcaat
tatgtgatagatgaagtggttcaacttctgtggaaattaccatattcaaaacgagcttta
agatcttatcacgtacgcgaggaagagcaaaggcagatccaaatggttactgctttgctg
attcagttgattcattgtagtgctaacctccctgatgctttaagaatggcttcaaatggt
aatgctgtattagaagcctctgttgatgttagttatccaattaaatgccatgaggcagcg
acagaatcctgctgtctgttttggagccgggtacttcagcggtttgcaagtgtgaagact
catgatgcttctgagctgaaatccattatagagaatcttgttacagatttactgacaact
ctaaatttacctgaatatcctgcttcagctcctattctagaggttctatgtgtcctacta
cttcagaatgccgggccaaaatctaaggatgtctctgcacgttccctggcgattgatatt
cttggtacaattgctgcaaggttgaagcgtgatgctttggtttgtagccaggaaaatttc
tggatacttcaggatttacttagtcaggatgctgctgctcagcatcatccaaaagataca
tgttgtgtctgtttgggaggaagggtagaaaatttgttcatatgtcatggttgccagagg
ctttttcatgctgattgcctgggcattaaagaacatgaagtttccagtcgaaaatggtct
tgccagacatgcatctgtcataagcaactacttgtattacaatcatgttgcaattcccag
caaaagaatgatgtgaaaaagaatcatgatacagattctgaagtttctaagcaagagatt
gttcaacagttacttctgaattaccttcaagacgttacttcagctgatgatctgcatctt
ttcatctgctggttttatctctgcttgtggtacaaagatgattcaaattgtcagcagaag
tccagttactaccttgctagaatgaaatcaaaaatcattgtacgggattctagtactgtg
tcttctatattgactagggattcagtcaagaagattacttcagctttgggccaaaacagt
tcattttgccgagggtttgataagattcttcacacgcttctggcaagcttgagggagaac
tctcctgttattagggctaaggctttaaaagcagttagtatcattgtagaggcagatcca
gaggtattgggtgataagcgagtacaatcagctgttgaaggaaggttttgtgattctgca
atatctgttcgagaagcagcattggaacttgttggtaggcatatagcttcacatccaggt
gtgggttttaagtattttgagaagattgctgagagaatcaaagatactggagtaagtgtt
cggaaacgagctataaaaatcattcgagatatgtgcacttcaaatgccaacttctctgga
tttacaagagcttgcacagagataatttcacgtgttagtgatgatgaagcaagcatccag
gaccttgtttgcaaaacatttagtgagttttggtttgaggagcctcctgcatcacaaact
caggtctttggggatggtagtactgttccacttgacatagttaagaaaacagagcaaatt
gttgaaatgttgagaggaatgcccaataatcaacttcttgtaactgtaataaagcgcaat
ttgtcacttgattttttgccgcaatctgcaaaagccgttggggtaaacccagtgtccctt
gcaatagtgcgtaagcgttgtgagttgatgtgcaaatgcttgctggagaagatgttgcag
gttgacgaaatgaacaatgatggagtggaagtgggtgcacttccatatgtgttagtcttg
catgcattttgtcttgtggacccaactctctgtgcacctgcttcaaacccttcccaattt
gttgttacattgcagccatatctgaagagtcaggttgacaaccgcacggttgcacagcta
cttgagagtatactattcataattgatgctgtgcttcccatgcttgggaagttgcctccg
agtattgttggggaacttgagcaagatttgaaacagatgattgtccggcattctttcttg
acagttgtccatgcctgtatcaaatgcctctgctctgtgagtaagatgtctggaaaaggg
gctgctgtagttgaacaacttattcagtttttcttcaaatgtttggatactcaggcagtt
gataacaagcagaaagttggacgatctctcttctgtcttgggttgctaatccgttatggc
aatagattgttagcaagctccagtaataaactcattgatgttggaagcagtgtcaaattg
tttatgaagtatctctgtgtggaggattttgttgtcaaggttagatcattgcaggcacta
gggtttgtactaattgctaggcctgaatatatgctggaaaatgatgttggaaaagtactg
gaggaaacattatcctctgcatctgatactcgccttaagattcaaggattgcaaaacatg
ttcgagtatcttctagatgctgaaagtcaaatgggaacggataaagataatgaaaatgtt
gctggttactcagttggagccgggaagagtgtacctgttgctgctggtgctggggatact
aacatatgtgggggtatagttcagttgtattgggataatattttgggcagatgtttggat
ttcagtgaacatgttcgtcaatcagccctgaagattgttgaagttgtgctgcgccaaggt
cttgttcatccaatcacctgtgttccataccttatagcccttgaaacggatcctttggag
tcaaattcaaagttggctcatcatcttctgatgaatatgaatgaaaagtaccctgcattt
tttgaaagccgcttgggtgatggacttcaaatgtcatttatgtttatgcaatctatttgt
ggcagttctgaaaatgttgatcataagattcaatctaagacctctacttctggaaaaggg
aagcccgaggctggctcccttgctcaagctaaacttggggtttctcgaatttacaagctc
atccgagggaaccgggtgtcaaggaacaaatttttgtcctcgatcgtgcggaaatttgat
aatccaagatggaataaattactaatagctttcttaatatactgcacggaagtcctagca
ttgctgccattcatttcacctgacgagcccctttatttaatctatgctatcaatcgagta
gttcaagtaagggctggaccactagaagcgaactttaaagcctggacttcaagcatttca
cgtcattgcacacctcatgggaatggaatgtatcaacaggggaccgatgagcctactgtt
gcaagccaagtaatgccattggatttgaatggaacatttcagcaaaatgtagatcttcag
ccaaatatgaatgacatgagaaccctggatttaaatggatcaaatcatcaactgacagat
tatcctttatcgtataatggtagctcagaagcaaatctgcattctgtgggttacacagat
cctttttccttcgcaaaagatgatctggagaaagttcaggccgactgtttatcagcaatt
gcattgcagcttcttttgaagctaaagagacacctaaaaatcatgtatagtcttgatgat
gcccgttgtcaggcttattctcctaccgaacaaccgaaacctggagaggttatctccaga
cagaatattgcttttaatattggtgattcacagttcagtttgcctacaagtccgcaagaa
ttgatacaaagatatcaggaatttaaacatgccttgagggaagacactgtggactattca
cattacactgcaaatataaaacgaaagcgacctacaactacgccaagaagagttcaagtt
cggaaacctgtatacgtggcaggtgggtacgacaacggggatgatgatgaggattatact
ggcggaagtgcgacacgcaagataagttttagtggccgcaggagtagccttaagaactca
aggcaatatggattgatgtaa
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