Glycine soja (wild soybean): 114398419
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Entry
114398419 CDS
T06057
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114398419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsj03000
]
114398419
Transcription factors [BR:
gsj03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
114398419
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114398419
NCBI-ProteinID:
XP_028216409
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Position
19:50387377..50400803
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AA seq
819 aa
AA seq
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MHDRTFNSLLLHHGFTSSSITLSSASACFHHNGLTIWCVPCHKKRKEIFLLPTPRQGRSE
AALASSTRPLMDADSSGEEVLIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIE
EHIGTKTAVQIRSHAQKFFTKLEKEAFVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTNV
GGAPTLHSGARHGKPLISIVSSLGKQALGLEKEPLPEKHDVDLRPSTVKENKDQSCSKVF
TILQEAPCSSVSSANKNSTSILVPLRNSCALRKFIPSVKDVITQDETNDSFVTDDLENQK
LEIDDGKHTQKSNGTCKVSKSENSGASELVQTEKTDGLNCALTIEGVQGNQNYPRHVPVH
VVDGNLGTSTQNPSPDMVFQDSIFQPKGGVNGQPNLVTISATSNISESQNNTARSSIHQS
FPPCPTFTQDDYHSFLQVSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANAETSADSPM
CTPDFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASAIAVPLM
NIDESPQKTEQEEIKPQNSSLQDQILDPEHSEAQHSAPKSPAVFSSKSEERGDANLNTSP
KATNHETNQVISENPDSNKMKGRKPVDRSSCGSNTTSSSEETELLLKDEKEKEEPKTPDA
NILDTELSNRRSRSINNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPTHDLINEDNQID
SIKDNDQNTDYKDEDLESKKCSSNSDGVQKNLLFVKDNNEEEGLLIIGLGPGKLKTRPTG
FKPYKRCSVEANENRIGTACNQGEEKGPKRIRLNGEAST
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatcgcaccttcaactctcttcttcttcaccatggctttacttcaagtagcatc
accttatcatcagcttctgcttgctttcaccacaacggcctcactatttggtgtgttcca
tgtcacaaaaaacgaaaggagatattccttttacccactcctcgtcagggaagatctgaa
gcagcgctagctagcagcacacgtcctctaatggacgccgactcctctggagaagaagtg
cttattaaaacaagaaagccatatactatcacaaagcaaagagaacgatggacagaggag
gaacataacagatttctagaagccttgaagctatacgggcgagcatggcagcgcatagaa
gagcatataggaacaaagactgctgtgcaaatcaggagtcatgctcagaaattctttaca
aagttggagaaagaggcctttgtaaagggtgttccaataggacaagctcttgatatagac
atcccccctccacggccaaaaagaaaaccaaacaatccttatccccggaagaccaatgtt
ggtggtgccccaacattacatagcggagcaaggcatggaaagcctctcatttcaattgta
tcttcacttggtaaacaagcattgggcttggagaaagaaccccttccagagaagcatgat
gtcgacctaaggccatcaaccgtaaaagaaaataaggaccaaagctgctcaaaagtattt
accattctccaagaggcaccctgttcatctgtatcttccgccaacaagaattcaacatca
atattagtgccgctgagaaattcatgtgccctaaggaagtttataccttcggtgaaagat
gtgataactcaagatgaaaccaacgactcttttgttactgatgatcttgaaaatcagaag
ttggagatagatgatggcaagcacactcaaaagtctaatggcacttgtaaagtctctaag
tcggagaattctggtgcttcagaattggttcaaactgagaaaacagatggtcttaattgt
gcattaacaattgaaggggtgcaaggcaatcagaattacccaagacatgtccctgtgcac
gttgttgatgggaaccttggaactagtactcaaaatccatccccagatatggtgtttcaa
gactccatatttcagccgaaaggaggggttaatgggcaacctaaccttgtcaccatttct
gctacatcaaacataagtgaaagtcaaaacaacactgcacggtcctctattcatcaatca
tttcctccttgtcctaccttcacacaggatgattatcattcatttcttcaggtgtcctcc
acattttcaagtcttattgtctctaccttgctacaaaaccctgcagcccatgctgcagca
agttttgctgctacattttggccctatgcaaatgcagaaacttccgcagattctcccatg
tgcactccagattttccatcaagacaaattggctcgcctccaagtgtgacagctattgca
gctgctacagtagctgccgcaaccgcatggtgggctgcccatggactgcttcctttgtgt
gctccgctccatacagcttttgcctgtcctcctgcatcagcgattgcagttccattaatg
aatattgatgaatcaccacaaaaaacagaacaagaagagattaaaccacaaaattcttct
ctgcaagatcagatactggatccagaacactcagaagctcaacattcagctcctaagtcc
ccagctgttttttcatccaaatctgaggagaggggagatgccaatttaaatacttcacca
aaggctactaatcatgagacgaatcaggtcatttctgagaaccccgattccaacaaaatg
aagggcagaaaacctgtagaccgttcctcatgtggttccaacacaacctctagcagtgaa
gagaccgagttactactgaaggatgagaaagaaaaggaagagcccaaaacacctgatgca
aacattttagataccgagcttagtaatcgtcgtagtagaagcattaacaaccttactgat
tcttggaaggaggtctctgaagaggggcgtcttgcctttcaggctctattctccagagag
gtgttgccacaaagcttttcacctactcatgatttgataaatgaggataatcagatagac
agcatcaaggataacgaccaaaacacagactacaaagatgaagaccttgaaagcaagaaa
tgcagttctaatagtgatggggtgcagaaaaatctgctatttgtcaaagataacaatgag
gaggagggactgctaatcataggtcttggaccaggaaagctaaagactcgtccaacaggg
tttaaaccttacaaaagatgttcggtagaggccaatgaaaacaggatcggaacagcctgc
aaccaaggtgaagaaaaaggtcctaagagaatacgcttgaatggggaggcttcaacttga
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