Glycine soja (wild soybean): 114399709
Help
Entry
114399709 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114399709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114399709
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114399709
Spliceosome [BR:
gsj03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114399709
Complex B
114399709
Complex C
U2 SnRNP specific factors
114399709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
114399709
NCBI-ProteinID:
XP_028217726
LinkDB
All DBs
Position
19:47009884..47014170
Genome browser
AA seq
768 aa
AA seq
DB search
MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSARHGHDHYEDTDIDNIDFDDNNNDD
GSKNNNGGGNDDDDEIDPLDAFMEGIHEEMRAAPPPKEKAEDRYRDDEDDDPLESFLKAK
KDLGLTLASDALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVIDKKKIEPIPALDHSS
IDYEPFNKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKTFEDCGFPSQIMNA
IKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGP
IGVICAPTRELAHQIYLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRL
IDMLKMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEK
LAREILSDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPEMIDQGDTLVFASK
KATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLDIKSI
KSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITLKEARFAGELVNSLVAAGQNVSV
ELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGRGVRGVDFGLGIGYNSESNNAPSTTAP
SRSAAVNSLRTGMMSQFKSNFVAASSNSQNQGFGSNTSMAANKRPALPGFVSGGSIGGDI
NTYQNTASPNPATSAVNSTSQVSGVNPGQKNTNSSKPKERRRPSGWDR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggaagttcggattcgaagggttcggcataaaccgccaatccacctacagc
ttcgagcgatcccagccccctcagcgactctacgtccctccctccgcgcgccacggccac
gaccactacgaagacaccgacatcgacaacatcgacttcgacgacaacaacaacgacgac
gggagcaagaataacaacggtggcggcaacgacgacgacgacgaaatcgaccccttggat
gccttcatggaggggattcacgaggagatgcgggctgccccgccgccgaaggagaaggcg
gaggaccggtaccgcgacgacgaggacgacgatcccctggagagctttctgaaggcgaag
aaggatttagggttgactctcgcgtccgacgcgctgcacgctgggtatgattccgacgag
gaggtttatgctgctgccaaagctgtggatgctggtatgattgagtatgattctgatgat
aaccctattgttattgacaagaagaaaattgaacccattcctgctctcgatcactcttcc
attgattacgagcctttcaataaggatttttatgaggagacaccttcaatatcaggtatg
agtgagcaggatgtaagtgaatacagaaagagtttggctattcgtgtatcgggttttgat
gttcccaagccaataaagacatttgaggactgtgggtttccttcgcagattatgaatgct
attaaaaaacaaggatatgagaagccaacatctatacaatgtcaggctttgccagttgtg
ctttcgggcagggatatcattggtatagcaaaaactggttctggtaaaactgcttctttt
gtgcttcctatgattgtgcatatcatggatcagcctgagcttcagaaggaggaggggcct
ataggggtcatatgtgcacctaccagagaattggcgcatcaaatatatctggaggccaag
aaatttgcaaaagcatatggggtgcgtgtctctgctgtctatggtggaatgtcaaaactt
gaacagttcaaagaactgaaggcgggatgtgagatagttgttgctacaccaggaagatta
atagacatgctgaaaatgaaggcattgacgatgatgagagcaacttacctggtgcttgat
gaggctgatcggatgtttgatcttgggtttgagccgcaagtaaggtcaattgttgggcag
attaggccggaccgccaaactttactcttttctgcaactatgcctcgaaaagttgaaaag
ttggccagggaaatcctttctgatcctattagagtaactgttggagaggtggggatggca
aatgaagatattactcaagttgttcatgtaattccttccgattctgagaaattgccctgg
cttctggaaaagctgcctgaaatgattgatcaaggtgataccctagtttttgcttcaaaa
aaggctactgtggatgaaattgaatcacaattggctcaaagaggctttaaagttgctgcc
ttgcatggtgataaagatcaagcttctcgtatggatattttacagaagtttaaatctggc
ctctaccatgtgctaattgcaactgatgttgctgcccgtggtcttgacatcaagtcaatt
aagtcagtggtaaactttgatattgcaaaagatatggacatgcatgtccatcgcattgga
agaacaggccgtgctggtgacaaggatggggttgcatacactcttataactctgaaagaa
gcacggtttgctggtgaattggtcaatagcttagttgctgctggtcagaatgtgtctgtg
gagttgatggatcttgctatgaaggacgggagattcaggtcaaaacgtgatgcaagaaaa
ggaggtggaaaaaaaggcaaaggtagaggtgggggtggcagaggcgtgcgaggagtggat
tttggcttgggtattggatataattctgagtcaaataacgcaccatctaccacagctccc
agtcgatctgctgccgtaaattctctgagaacaggaatgatgtcacaatttaagagtaac
tttgttgctgcttcatcaaactctcagaatcaaggattcggtagcaatacaagcatggct
gctaataagagaccagcactccctggttttgtatccggtggatcaattggcggtgacata
aatacttatcagaatactgcttcacccaatcctgctacatcagcggtaaattccaccagt
caagtttctggagtaaatcctggtcagaagaacacgaacagttctaaacctaaagaaagg
cggaggccatcaggttgggatagatag
DBGET
integrated database retrieval system
