Glycine soja (wild soybean): 114400041
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Entry
114400041 CDS
T06057
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114400041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114400041
03036 Chromosome and associated proteins [BR:
gsj03036
]
114400041
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114400041
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114400041
PBAF complex
114400041
GBAF(ncBAF) complex
114400041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
114400041
NCBI-ProteinID:
XP_028218091
LinkDB
All DBs
Position
19:24467224..24470513
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AA seq
543 aa
AA seq
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MSVNNNNPSKGIGASSSSFGNAGVPSNSIPSNPGFSQSQGQAQIPVGYQGQFPLSQAHAI
VQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGVSSPLISTPGNASGKRI
PLKPPMRPVGFSPPNSFSPLRPVELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLE
FESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNAELPTWTLKI
VGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIIMWENARSPAPH
EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARK
LQNPNDPSYFHCDQPLLKVFGEEKMKFTMVSQKISSHLFPPQPILLEHKIKLSGNNPAGT
ACYDVMVDVPFPIQRELSALLANVEKNKEIETCDEAICGIIRKIHEHRRRRAFFLGFSQS
PVEFINALIESQSKDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAP
GST
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacaataataacccttctaagggcattggggcctcttcctcatcctttggt
aatgctggagtaccctccaattctataccttcaaaccctggattttcacagtcccaagga
caggcccagattcctgttggttatcaaggacagtttccactgtcccaggcccatgctatt
gtccaagctcagtccaaggcccaggcccaggcccaggcccaagcagcagctgcagctcat
gctcaactccaggctcatttgcaagctcagggattgagtcttaatcagaaccaggctggt
ggtttgggggtgtcgtcaccgttgatttccacgccgggtaatgcgagtgggaaacggatc
cctctgaaaccccccatgcggccagttgggttttcccctcccaacagcttctccccattg
agaccagtggagctcacgcctgctgctcggaggaagaagcagaagcttcctgagaaacag
ctgcaagataaagtggctgctattctgcccgagtctgcgctgtatactcagcttcttgag
tttgagtctcgcgttgatgctgcgcttgctagaaagaaggctgacatccaggaagcgctc
aaaaacccgccgtgtattcagaaaactcttcgtatttatgtatttaatacttttgctaat
caaattcgcacaattccaaagaagccaaatgcggagcttccaacctggacactgaagata
gttgggaggatattggaggatggtgtagaccctgatcagccaggagtagttcagaagtcg
tctcctttgtatccaaagttttcagcttttttcaaaagagtaactatttccttggatcag
agactgtatcccgataatcatattattatgtgggagaatgctcgatcacctgctccacat
gaaggttttgaagtaaagaggaaaggggataaagaatttacagtgaacatacggctggaa
atgaattatgtgccagagaagtttaagctttcaccagctttgacagaagttcttggtatt
gaggttgatacccgcccgagaattgttgctgcaatctggcactatgtgaaggctaggaaa
ttgcaaaacccaaatgacccttcctactttcactgtgatcagcctcttctgaaagtattt
ggagaagaaaagatgaagtttacaatggtttcacagaaaatatcatcgcatttgttcccc
ccacagcctatacttttggagcataagatcaagctctcgggaaacaatcctgctggtact
gcttgttatgatgtgatggttgatgttccttttcctattcagagggagttgtctgcctta
ttggctaacgtggaaaagaacaaagagattgagacatgtgatgaagcaatatgtggaatc
attagaaaaatccatgagcaccgtaggagacgggcattttttcttggttttagtcaatcg
ccagtagaatttattaatgcattgattgaatctcaaagcaaggatctgaaacttgtatcc
ggagaacctagtcgcaatgcagaaaaagagcgtcgttcagatttcttcaaccaaccatgg
gttgaagatgctgttattcgttacctgaatcgcaaaccagctgtgggaagtgatgctcca
ggaagcacatga
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