KEGG   Glycine soja (wild soybean): 114400072
Entry
114400072         CDS       T06057                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    114400072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114400072
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     114400072
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st RAWUL ANAPC4_WD40 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_Vps41 Mcl1_mid Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 114400072
NCBI-ProteinID: XP_028218140
LinkDB
Position
19:complement(48944694..48954615)
AA seq 763 aa
MHRVGSASNGNNSTRPRKEKRLTYVLNDSDDSKHCAGINCLALLMSAASDGSDYLFTGSR
DGRLKRWALGVDRATCLATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWNALSFGTCTR
TLRQHSDYVTCLAAAEKNNNTVASGGLGGEVFIWDIEAALAPSKCNDAMVDESSNGINGS
GNLLPLTSLRTINSSDNMSMHTTQTQGYVPISAKGHKDSVYALTMNESGTILVSGGTEKV
VRVWDARSGSKTLKLRGHTDNIRALLLDSSGRYCLSGSSDSMIRLWDIGQQRCVHSYAVH
TDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGEHPILQLALHDDSIWVAST
DSSVHRWPAEGCDPQKIFQRGNSFLAGNLSFSRARVSPEGSTPVPVYKEPTLTILGTPAI
VQHEVLSNKRHVLTKDASGSVKLWEITKGIVVEDYGKVSFEEKKEELFEMVSIPAWFTVD
TRLGSLSVHLDTPQCFSAEMYSADLNIVGKPEDDKVNLARETLKGLLAHWLRKRKQRMGS
PAPANGELLSGKETASRSSTHSRIEVDGSSENDAMVYPPFEFSVTSPPSIITEGTHGGPW
RKKITDLDGTKDEKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAP
RILRIHKVVNYVIEKMVLDKPLDSLSAEGSIAPGLTGSQSQHQAVGDGSFRSGFQPWQKL
RPSIEILCYNQVLSPEMSLATVRAYVWKKSDDLVLNYRLVQGR
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcaccgcgtgggtagtgcaagtaacggaaacaattcaactcgccctcgtaaggagaag
agattaacctatgtgttgaatgattctgatgactcaaagcattgtgcaggcataaattgt
ctggctctacttatgtctgcagcatctgatgggtctgattatctgttcaccggaagccgt
gatggcaggttaaaacgatgggcactaggggtggatagagcaacatgcttggctaccttt
gaatctcatgtcgattgggttaatgatgctgttcttgttggtgatagtacacttgtttct
tgttcctcagatacaacccttaagacatggaatgccctgtcctttggaacttgtactagg
actctccggcaacactctgactatgttacttgccttgcagcagctgaaaaaaataacaat
actgttgcctctggtggccttggtggggaggtttttatatgggatatcgaggctgccctt
gctccctctaagtgtaatgatgctatggttgatgaatcttcaaatggtatcaatggttct
ggcaacttactaccattgacatccttgcgtactattaactcaagcgacaatatgtccatg
cacaccactcaaactcagggatacgttccaatttctgccaaaggccataaagattctgtt
tatgcattgactatgaatgaaagtggaacaattcttgtctctggtggcacagaaaaggtt
gtgcgtgtctgggacgcaagatcaggatcaaagactctaaagctaagagggcatacagat
aacatcagggctctgcttctggattctagtggcagatattgtttatcaggatcttcagac
tctatgataaggctttgggatataggtcagcagagatgtgtgcattcttatgcagttcat
acagattctgtttgggcacttgccagcaccccaacatttagtcatgtttatagtggaggg
agagacttttcattatacttgacagatttgcaaactagagagagtagtttgctttgcaca
ggcgagcaccctattcttcaattggctttgcatgatgatagcatatgggttgcatcaaca
gactcttcagttcatagatggccagctgaaggatgcgaccctcaaaagattttccagaga
ggcaattcttttttagctggaaacttgtctttttcaagagcaagagtttcaccagaagga
tctacccctgttcctgtatataaagaacctaccttaactatcttgggtacacctgcaata
gtacaacatgaagttttgagtaataagaggcatgtgctgacaaaggatgcatctggttca
gtgaagctgtgggagattaccaaaggcattgtcgttgaagattacggaaaggtttcattt
gaggagaaaaaggaagagctatttgagatggttagcattcctgcatggttcacagtggat
accaggcttggaagcttgtcagtccatttggacactccccaatgtttttcagcagagatg
tattcagctgatcttaacattgtaggcaagcctgaagatgataaggttaatttggctcga
gaaacccttaaagggctactggctcattggttgagaaaacgaaagcaaagaatgggatcc
ccagctccagctaatggagaactattatctggaaaggagactgcttctagaagtagtacc
cattcaagaattgaggttgatggtagttctgagaatgatgctatggtttatcctccattt
gaattctcagttacttcccctccttccattattactgagggcactcatggaggtccatgg
agaaaaaaaatcactgatttagatggaaccaaggatgagaaagactttccttggtggtgt
ctggactgcgtcttgaataatcggttacctcccagagaaaatacaaaatgcagtttttat
ttgcaaccatgtgaaggatcttcagtccagatcctcacacaagggaagctaagtgcccca
cgtatattaagaattcacaaagttgttaattatgtaatagagaagatggtgcttgacaaa
cctttggacagcttaagtgctgaaggtagtattgcccctggtcttactgggtcacagtca
cagcatcaagcagttggggatggatcttttcgatctggatttcagccatggcaaaagctt
agaccttctattgaaatattgtgctacaaccaggtgctgtctcctgaaatgagcttagcc
acagttcgagcttatgtatggaagaaatcagatgacttggttctaaattacagactagtt
caaggcaggtga

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