Glycine soja (wild soybean): 114400132
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Entry
114400132 CDS
T06057
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114400132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114400132
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
114400132
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
114400132
NCBI-ProteinID:
XP_028218230
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Position
19:46228366..46232206
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AA seq
587 aa
AA seq
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MQRMAYTFSFPEEVLEHVFSFIWNERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPL
MVVKRFPEVRSIALKGKPHFADFNLVPDGWGGYVCPWIAAMARAFPCLEEIRLKRMVITD
ESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEEDLSGHWLSH
FPDSYTSLVSLNISCLNNEVSLSALERLLGRCPNLRTLRLNRAVPLDRLPNLLLQCPQLV
ELGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSY
AIIQSSDLIKLISQCPNLLRLWVLDYIEDAGLYALAASCKDLRELRVFPSDPFGLEPNVA
LTEQGLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRTNLTRFRLCIIEPRTPDYLTHE
PLDSGFGAIVEQCKDLQRLSLSGLLTDRVFEYIGTCGKKLEMLSVAFAGDSDLGLHHVLS
GCDNLRKLEIRDCPFGDKALLANAEKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVI
DERGPPDSRPDDCPVEKLYIYRTIAGPRLDMPGFVWTMEDDSSLRLE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaatggcgtacacgttttcgtttccggaggaggtgctggagcacgtgttctcg
ttcatatggaacgagagggacaggaacgcgatctcgctggtgtgtaagtcatggtacgag
atcgagaggtggtgcaggaggaaggtgttcgtggggaactgctacgcggtgagccctctg
atggtggtcaagcggttcccggaggtgagatccattgcgctcaaagggaagccgcacttt
gcggacttcaatttggtccccgatggctggggaggttacgtctgcccctggatcgccgcc
atggctcgcgccttcccctgcctcgaagaaatcaggctcaagaggatggtcatcaccgac
gagagcttggaactcatcgctaagtccttcaagaacttcaaggtcttggttctcacttcc
tgtgagggttttaccactgatggacttgccgccattgctgccaactgcaggaatttgagg
gaattggacttgcaagagagtgaagtggaggaggaccttagtgggcactggctaagccat
tttcctgattcctatacgtcattagtttcacttaacatctcttgcttaaacaatgaggtg
agtttatctgcgctagagcgtctgcttgggaggtgtcccaacctgcggaccctccgtctc
aatcgtgccgtgccccttgatagactacccaacctacttctccagtgtcctcagctggtt
gagttaggcacaggagtctactcaactgagatgcgaccagaggtcttctcaaacctggaa
gcagcattttctggctgcaagcagttgaagagcttgtctggcttttgggatgtgctccca
tcctaccttccagctgtctaccccatctgctcaaggctaacatcgctaaacttgagttat
gctattattcaaagctctgatcttattaagcttatcagtcaatgcccaaatttgttgcga
ttatgggtgctggattacatagaagatgctggtctttatgcccttgctgcatcatgtaag
gatctaagagagttaagggtgtttccttctgacccatttggtttagaaccaaatgttgca
ttgacagaacagggccttgtctctgtgtctgaaggttgccccaagctccaatcagttcta
tatttttgtcgtcaaatgtcgaatgcagccctacatacaattgcgcggaacaggactaat
ttgactcgttttcggctttgtattattgagcctcggactcctgactatctaacccatgaa
cccctggattctggttttggggctattgtagagcaatgcaaggatcttcaacgcctatcc
ctatctggtcttcttactgaccgtgttttcgagtatatcgggacttgtggtaagaagctg
gagatgctatctgtggcttttgctggagatagtgatttgggacttcatcatgtgctatca
gggtgtgataatcttaggaagctggagatcagggactgcccctttggtgacaaggccctt
ttggcaaatgctgaaaagctggagacaatgcgatccctttggatgtcctcctgctcggtg
agttatggagcatgtaagctactgggtcagaaaatgccaagactcaacgttgaagtcatt
gatgaaagaggacctccagattcaaggccagatgattgtccagttgagaagctttatata
tacaggactattgccgggccaaggttggacatgcctggttttgtgtggacaatggaagat
gattcttcactaaggcttgagtga
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