KEGG   Glycine soja (wild soybean): 114400155
Entry
114400155         CDS       T06057                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    114400155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114400155
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     114400155
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_IFT122_1st Ubl_WDR48-Bun107 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd ASA1 NBCH_WD40 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_RFWD3 RAWUL Beta-prop_IP5PC_F TRM82_WD Beta-prop_DCAF4 ANAPC4_WD40 PAC11 Beta-prop_DCAF12 CFAP251_N Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_Vps41 DNAI3_WD Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 114400155
NCBI-ProteinID: XP_028218266
LinkDB
Position
19:complement(48904336..48914766)
AA seq 764 aa
MHRVGSASNGNNSTRPRKEKRITYVLNDSDDTKHCAGINCLALLTSAASDGSDYLFTGSR
DGRLKRWALDVNRATSSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWNALSFGTCTR
TLRQHFDYVTCLAAAGKNSNIVASGGLGGEVFIWDIEAAITPVSKCNDATIDESSNGING
SGNLLPLTSLRPINSSNNMSMHTTQTQGYIPIAAKGHKDSVYALAMNESGTILVSGGTEK
VVRVWDARSGSKTLKLRGHTDNIRALLLDSSGRYCLSGSSDSMIRLWDIGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGEHPILQLALHDDSIWVAS
TDSSVHRWPAEGYDPQKIFQRGNSFLAGNLSFSRARVSIEGSTPVPVYKEPTLTILGTPA
IVQHEVLNNKRHVLTKDASDSVKLWEITKGVVIEDYGKVSFEEKKEELFEMVSIPAWFTV
DTRLGSLSVHLDTPQCFSAEMYSADLNIVGKPEDDKINLARETLKGLLAHWLRKRKQRME
SPAPANGELLSGKDISSRSLAHSRIEVDGSSENDAMVYPPFEFSVTSPPSIITEGTHGGP
WRKKITDLDGTKDEKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSIQILTQGKLSA
PRILRVHKVINYVIEKMVLDKPLDSLSGDGSFAPVLTGSQSPLQAVGDGSFQSGFKPWQK
LKPSIEILCNNQVLSPEMSLATVRAYIWKKSDDLVLNYRLVQSR
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggtagtgcgagtaacggaaacaattcaactcgcccgcgcaaggagaag
agaataacctacgtgttgaatgattctgatgacacaaagcattgtgcaggcataaattgt
ctggctctacttacatctgcagcatctgatgggtctgattatctcttcactgggagccgt
gatggtaggttaaaacgatgggcactagatgtgaatagagcaacatcatcggctaccttt
gaatctcatgtcgattgggttaatgatgctgttcttgttggtgatagcacacttgtttct
tgttcttcagatacaacccttaagacatggaatgccttgtcctttggaacctgtactaga
acactccgacaacactttgactatgttacttgccttgcagcagcaggaaaaaatagcaat
attgttgcctctggtggccttggcggggaggtttttatatgggatatcgaggctgccatc
actccggtttctaagtgcaatgatgctacaattgatgaatcttcaaatggtatcaatggt
tctggcaacttactaccattgacaagcttgcgtcctattaactcaagcaacaatatgtcc
atgcacactactcaaactcagggatacattccaattgctgccaaaggccataaagattct
gtttatgcattggctatgaatgaaagtggaacaattcttgtctctggtggcacagaaaag
gttgtgcgtgtctgggatgcaagatcaggatcaaagactctaaagctaagaggacataca
gataacatcagggctctgcttctggattctagtggcagatattgtttatcaggatcttca
gactctatgataaggctttgggatataggtcagcaaagatgtgtgcattcttatgcagtt
catacagattctgtttgggcacttgccagcaccccaacatttagtcatgtttatagtgga
gggagagacttttcattatacttgacagatttgcaaactagagagagtagtttgctttgc
acaggcgagcaccctattcttcagttggctttgcatgatgatagcatttgggttgcatca
acagactcttcagttcatagatggccagctgaaggatacgacccacaaaagattttccag
agaggcaattcttttttagctggaaacttgtccttttcgagagcaagagtgtcaatagaa
ggatctacccctgttcctgtatataaagaacctaccttaactatcttgggtacacctgca
atagtacaacatgaagttttgaataataagagacatgtgctgacaaaggatgcatctgat
tcagtgaagctgtgggagattaccaaaggtgttgtgattgaagattacggaaaggtttcg
tttgaggagaaaaaggaagagctatttgagatggttagtattcctgcatggttcacagtg
gataccaggcttggaagcttgtcagtccatttggacactcctcaatgtttctctgcagag
atgtattcagcagatcttaacattgtaggcaagcctgaagatgataagattaatttggct
cgagaaacccttaaagggctattggctcattggttgagaaaacgaaagcaaagaatggaa
tccccagctccagctaatggggagttattatctggaaaggatatttcttctagaagtctt
gcccattctagaattgaggttgatggtagttctgagaatgatgctatggtttatcctcca
tttgaattctcagttacttcccctccttccattattactgagggcactcatggaggtccc
tggagaaaaaaaattactgatttagatggaaccaaggatgagaaagacttcccctggtgg
tgtctagactgcgttttgaataatcggttacctccccgagaaaatactaaatgcagtttc
tatttgcaaccatgtgaaggctcttcaatccagatcctcacacaagggaagctaagtgcc
ccacgtatattaagagttcacaaagttattaattatgtaatagagaagatggtgcttgac
aaacctttggatagcttaagtggtgatggtagttttgcccctgtacttactgggtcacag
tcaccacttcaagcagttggggatggatcttttcaatctggatttaagccttggcaaaag
cttaaaccttctattgaaatattgtgcaacaaccaggttctgtctcctgaaatgagctta
gccacagtgcgagcttatatatggaagaaatcagatgacttggttctaaattacagacta
gttcaaagcaggtga

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