Glycine soja (wild soybean): 114400165
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Entry
114400165 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114400165
03015 mRNA surveillance pathway
114400165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114400165
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114400165
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114400165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
IF2_N
Motif
Other DBs
NCBI-GeneID:
114400165
NCBI-ProteinID:
XP_028218280
LinkDB
All DBs
Position
19:3467514..3471999
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AA seq
504 aa
AA seq
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MAEPSSTAATAATAATAATAATAATASTADPPAPVTKSWADEADEETNNTSTAESESSSI
NLEALTIDDKEKNSSKFLDDPDDSNIQAVTSGDTPYTSAARFEDLSLSPELLKGLYVEMK
FEKPSKIQAISLPMILSPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCVCPT
RELAIQNVEVLRRMGKYTGIASECLVRLDRDAVHVSKRAPIMAQVVIGTPGTIKKFISFK
KLGTSRLKILVFDEADQMLAQEGFRDDSLKIMKDIEKDNKKCQVLLFSATFNDTVKNFIS
RTVKMDHNKLFVKKEELSLDAVKQYKVYCPDELAKIDVIKDYIFEIGENVGQTIIFMATR
DSARLLHQALVNLGYEVTSIQGSLSNEERDKVVKEFKDGLTQVLISTDILARGFDQQQVN
LVINYNLPNKHSLRDEPDYEVYLHRVGRAGRFGRKGAVFNLICDENDERLMSKIENHFGT
CVTEVRAQSVEEYKAALKEAGLLQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgtcgtccaccgccgccaccgccgccaccgctgccaccgctgccaccgct
gccaccgccgccaccgcttccaccgctgatcctccggcgccagtgactaaaagctgggcc
gacgaagcagacgaagaaaccaacaacacctccaccgccgagtcagaaagctcctccatt
aacctggaagcgttaaccatcgacgataaagaaaagaactcttccaaattcttggatgat
cccgatgattccaatatccaagcggttacttctggcgacacgccgtacacctcggcggcg
aggttcgaggacctgagcctctcgccggagcttttgaaggggctctatgtggagatgaag
tttgagaagccgagcaagatccaggcgataagcttgccgatgatcctgagcccgccccac
cgggacctgatcgcgcaggcgcacaatggctccggcaagactacatgtttcgtgcttggg
atgctcagccgcgtcgacccaaaggtgcaggcgccgcaggcgctctgtgtctgccccacc
cgggagctggccattcagaacgtggaggtgctccgcaggatggggaagtacaccgggatt
gcatctgagtgccttgtgcggttggaccgggatgccgttcatgtatcgaaaagggcacct
attatggcgcaggtggtgattgggaccccagggacaatcaagaagttcattagcttcaag
aaacttgggacctcgaggttgaagattcttgttttcgacgaggctgatcaaatgcttgcg
caggaaggatttagagatgattctttgaagataatgaaagatatagaaaaagacaataaa
aagtgtcaggttcttctgttttctgctacatttaatgacaccgtcaagaatttcatttca
aggacagtcaagatggatcataataaactctttgtaaagaaagaagaactatctttagat
gcagtgaagcagtataaagtgtattgtcccgatgaacttgctaagattgatgtgataaaa
gattacatatttgaaataggagagaatgtggggcaaactattatatttatggccacaaga
gatagtgcaagattattgcaccaagcacttgttaatttgggctatgaggttacatctata
caaggttctcttagtaatgaagagagagacaaagttgtcaaggagttcaaagatggtttg
actcaagttcttatatcaacagatattcttgctcgtggctttgatcagcaacaggttaat
ttggtcatcaattataatcttccaaataaacacagtttacgggatgaaccagattatgaa
gtgtatctgcacagggttggcagagctgggcgttttgggcgcaagggggctgtatttaac
ctgatatgtgatgaaaatgatgaaaggctcatgtcgaagattgaaaaccattttggcact
tgtgtaactgaggtgcgagctcaaagtgttgaagaatataaagccgctctcaaggaagcc
ggtttactgcaatga
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