Glycine soja (wild soybean): 114400354
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Entry
114400354 CDS
T06057
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114400354
09122 Translation
03013 Nucleocytoplasmic transport
114400354
03015 mRNA surveillance pathway
114400354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114400354
03041 Spliceosome [BR:
gsj03041
]
114400354
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
114400354
Spliceosome [BR:
gsj03041
]
Common components
Common spliceosomal components
Cap binding complex
114400354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
114400354
NCBI-ProteinID:
XP_028218595
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All DBs
Position
19:complement(34902260..34920529)
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AA seq
863 aa
AA seq
DB search
MSSWRSLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDLSQSEILEFLLMCAEQLPHK
IPLYGTLIGLINLENEDFVKQLVVKTQSKFQDALDSGNCNGVRILMRLLTVMMSSKVLQP
SSLVAVFETFLSSAATTVDDEKGNPLWQSCADFYITCILSCLPWGGAELIEQVPEDIERV
MVGVEAYLSIRKHTFDIGLSFFENDDENGKGLSDKDFLEDLWDRIQVLSSHGWKVDSVPR
PHLSFEAQLVAGKSHEFGPICCPRLPSPPSVPSGVSIGKQKHEAELKYPQRIHRLNIFPP
GKIEDLQPIDRFVMEEYLLDVLLFLNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLML
PQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPK
GGPNFSFGAEDGKESNEHVLSGQLNNMVKGKAPVREIISWIDESVFPNNGLEVTLRVVVQ
TLLNIGSKSFTHLMTVLERYGQVFAKVCPDQDKQVMLIAEVSAFWKSNTQMTAIAIDRMM
GYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILSLKKNFSS
AEETAKEAKAELDAAESKLTLVDGEPVLGDNPTRLNRLKLHAEKTKKEVVSLQKSSEAKE
ALLAQAMEENEALFLLLYKSFSNVFIERLPEGARTLHELKSAQVDVVMAVDPEEPSSMEL
DNESQRPQNSQTNGEKKGGAYNVGEKEQWCIITLGYVKAFSRQYAAEIWPHVEKLDAEVL
TEDAPLLFRSSVYSGLRRPIHDA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggagaagccttcttctacgaatcggcgacaagagccctgaatatggagtc
tcctccgactacaaagatcacattgatacgtgctttggcgcccttcgccgcgagctcgac
ctctctcaatccgagattctggagttccttctcatgtgtgctgagcaattgcctcacaag
attcctctgtatggtaccctgattggcttaattaacttggaaaatgaggactttgtgaaa
caactagtggtgaaaactcaaagtaaatttcaggatgccttagattctggaaactgcaac
ggggttcgtattctaatgcggcttttgactgttatgatgagcagtaaggttcttcaacca
agctctttggtggctgtgtttgaaacatttttatcatcagctgccacaacagtagatgat
gagaaagggaatcccttatggcagtcatgtgctgacttttacataacttgcattttatca
tgcctcccatggggcggagcagaacttattgagcaagttcctgaagatattgagagagtg
atggttggtgtagaagcttacttgagcatcagaaagcatacatttgacatcggattatcc
tttttcgagaatgatgatgaaaacgggaaaggtcttagtgacaaggattttttggaagat
ttatgggatagaatacaggttttatcaagccacggatggaaggttgacagtgttccaaga
cctcatctttcatttgaagctcagctggttgctgggaagtctcatgaatttgggccaata
tgctgcccccgcttaccaagcccgccttcagtcccttctggcgtgtctattggtaaacag
aagcatgaagcagaattaaaataccctcaaaggatacaccggctaaacatatttcctcct
ggtaaaattgaggatctacagcctatagacagatttgttatggaagagtatctcctagat
gtgcttctgttcttaaatggctgtcgaaaggaatgcgcttctttcatggttggtctgcca
gtttccttcagatatgagtacctcatggctgaaacaatattctctcagctgctgatgctg
ccacaaccacctttcaaaccagtatattacacactggttattattgacctttgtaaggct
cttcctggagcttttcctgcagttgtagctggagcagttcgtactctctttgagaggatt
gctgatttggatatggagtgtcggacacgtctgatcctttggttctcacaccatttatca
aacttccagttcatctggccttgggaagagtgggcttatgtcctagacctcccaaggtgg
gcccctcaacgcgtctttgttcaggaggttttggagagggaagttcgcttgtcatactgg
gacaaagttaagcagagtattgaaaatgcacctggtttagaagaattgcttcctccaaag
ggtgggccgaactttagttttggtgcagaagatggtaaagaaagcaatgagcatgtactg
tctggacagctcaacaacatggttaaaggaaaggcacctgtccgtgaaataatctcatgg
attgatgaaagtgtgtttccaaataatggtctagaagttactcttagagtggttgtacaa
actcttctcaatattggatccaagagtttcactcatttgatgactgtcttagagagatat
gggcaagtctttgcaaaagtatgtcccgaccaggataagcaagtcatgctgatagctgaa
gtgagtgctttctggaagagtaacacccaaatgacagcaatagctattgacaggatgatg
ggttatcgacttgtttcaaatctggctattgtgagatgggtcttctcagcagaaaatatt
gagcaatttcatacatcagatcgtccatgggagattcttagaaatgcagtaagcaagaca
cacaatcgtatttctgatctaaggaaagaaatattatctcttaaaaagaatttttcatct
gctgaagaaactgcaaaggaggcaaaagcagagttagatgctgcagagtcaaaacttaca
ctagtggatggcgaaccagttcttggtgacaatcctactagattgaatagattgaaatta
catgctgaaaagacaaagaaggaggtggtgtctcttcaaaaatcttcagaagccaaggaa
gctcttcttgcccaagcaatggaggaaaatgaggcattgtttctcttgttgtacaaaagc
ttctcaaacgtgttcatagagcgccttcctgaaggagctagaacactgcatgagttgaag
tctgcacaagttgatgtggtgatggcggtggaccctgaagagccatcatcaatggaatta
gacaatgagagtcagagacctcaaaacagtcagacaaatggcgagaagaaaggtggtgct
tataatgtaggtgaaaaggagcagtggtgtatcatcactttgggttatgtgaaggccttt
tctaggcagtatgccgctgagatatggccccatgttgaaaagttggatgcagaggtattg
acagaagatgcacctcttctttttcggtcatctgtttattctggtcttcgaagaccaatt
catgacgcttga
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