Glycine soja (wild soybean): 114400605
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Entry
114400605 CDS
T06057
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114400605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114400605
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114400605
mRNA degradation factors
5'-3' decay
Decapping complex
114400605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
114400605
NCBI-ProteinID:
XP_028218933
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Position
19:45328113..45331900
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AA seq
359 aa
AA seq
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MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIEEILFTAAHVSFYDFNIESNQWSRKDVEG
SLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPD
ECEEVANLFNRILNAYPKTAPTTVLPVNISESEELQPVSIIPESPLESSSATASAIDAVE
DPANTNFLSTLKVTGNYASNMENFRQHSATVTSAPSGLFSTAPAVQIPSASHSTSSISGF
PLDSLETAKSGNQIINLVKPSTFFASTSSSSLLVPPISSSVQPSAAVQHSLNLPRQYGTP
VLQPFPPPNPPLSLTPISSSTPNRPVFSRDNVRDALLSLVQEDQFIDMMFQALLKVSHS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacgaagaaattgacgccgaatctggatcagcagagcacgaaggtgctgaat
ctcacggtgctccagcgaatcgatccgttcatcgaagagattctcttcaccgccgcgcat
gtctccttctacgacttcaacatcgaaagcaaccagtggagtcgcaaggatgttgaagga
tctctcttcgttgtcaagaggaattcacaaccacggtttcagttcatcgtcatgaatcga
cggaatacagataacctagtggagaatctattggattttgagtatgaacttaaaaagccg
tacctgttgtatcggaatgctgctcaagaagttaacggaatatggttttacaatccagat
gaatgtgaagaagttgcaaatctctttaacaggatacttaatgcatacccaaagactgct
ccaactacagtactgcctgttaacataagtgagtctgaggaacttcagccagtgtcaatt
atcccggaaagccctctagagtcgtcttcagctactgcttctgcaattgatgctgttgaa
gatcctgcaaatacaaacttcttaagcacattgaaggttactggaaattatgcttccaat
atggaaaattttagacagcattctgcaactgtcacttctgctcctagtggtttattctct
actgcacctgctgtgcaaattccatctgcctctcattcaacttcatcgatatcaggcttc
cctcttgactctcttgaaacagccaagagtggcaatcaaatcattaatcttgttaagcct
tccacgttttttgcatcgacgtcttcatcttcactgttagttccacctatttcttcatct
gtgcaacctagtgcagctgttcaacattccctgaatctgccacgccaatatggcactcca
gtacttcaacccttccctccccctaaccctcctctttctcttacccctatttcaagctcc
actccaaatagacctgtattcagcagggataatgtccgtgatgcacttttatcattggtt
caggaggatcaattcattgacatgatgttccaggcattactgaaggtgagtcattcatga
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