Glycine soja (wild soybean): 114400642
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Entry
114400642 CDS
T06057
Name
(RefSeq) protein PIR-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114400642
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114400642
Factors involved in mRNA localization
Other mRNA localization factors
114400642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
114400642
NCBI-ProteinID:
XP_028218988
LinkDB
All DBs
Position
19:49632234..49654793
Genome browser
AA seq
1277 aa
AA seq
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MAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKA
LNQLNALTQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FVVESLELDFALLFPERHVLLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNEAVI
PAFPDLHLSPAAIVKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYQRHYLIINHIGAI
RAEHDDFVIRFASAMNQLLLLKSTDGSDVEWSKEVKGNMYDMIVEGFQLLSRWTARIWEQ
CAWKFSRPCKDASPSFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTLVADAL
WETIHSEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQH
GGEESKANIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQL
ETFFYKLGFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVLE
SPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYY
KSWAACELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVF
RENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVS
FSSRLASQIWSEMHSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSSKPSFYCGTQDLNS
AHQSFARLHSGFFGTPHMFSIVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQDSLP
KSIGLLPFDGGVTGCVRLVKEHLNWETKSELKAEVLHGIKEIGSVLYWMGLLDIVLREKD
SMDFMQTAPWLGLLPGADGQIVTSQDGGDSPVVSLFKSTAAAMVSYPGCPSPTSFHIMSK
QAEAADLLYKANLNTGSVLEYALAFTSAALDKYCNKWSAAPKTGFIDITISKDFYRIYSG
LQIGYLEESAQVPSNSHERLGDSIAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAAS
VMQTHKNSQFAVQGWEALLEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPIHRI
KFDNTVSAFETLPQKGS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacccgtcgaggaagccattgcagctctatccacattctcgctcgaggatgag
caaccagaggtgcagggacctggagtgtgggtatcaactgagagaggtgcaacagaaagt
ccaatagagtatagcgatgtttctgcttacagactatctctatcagaggacacaaaagct
ctcaatcagctgaatgctcttacccaagagggaaaggagatggcatcagtgctttacaca
tatcgtagttgtgtcaaagcacttcctcagctacctgattctatgaagcaaagtcaagct
gacttatatttggaaacatatcaagttctggatttggaaatgagtcgtctgcgtgaaatt
cagcgttggcaagcatctgcttcctcaaaattagctgctgacatgcaacgtttttctagg
cctgagcgacgcattaatggccctacaatatctcatttgtggtctatgttgaagttgctt
gatgttttggtgcaacttgatcatcttaaaaatgctaaggctagcatacctaatgacttt
tcatggtataaaaggactttcacacaagtcagtggtcagtggcaagacactgattcaatg
agggaggaattagatgatttgcagattttcttgagcacaagatgggctattttgttgaat
ttgcatgttgagatgttccgtgtgaacaatgtagaggacattcttcaagttcttatagtc
tttgttgtagagtctttagaattggactttgcacttctctttccagagcgccacgttctt
ttgcgtgttttgcctgttcttgttgtcctagtgacatcatcagagaaagacagtgagtct
ctgtacaagagggtgaaaatcaacagactgatcaatatatttaagaatgaagcagtcatt
cctgcatttccagatctgcatttgtctcctgctgctatagtgaaggaattatcaacatac
tttccaaaattttcttcccaaactcgccttctcacccttccagcacctcatgagcttcca
cctcgtgaagcacaagaatatcagagacattatctgatcatcaatcatattggagccatc
cgtgcggagcatgatgattttgttattcgttttgcttctgcaatgaatcagctgttactg
ttgaagtcaactgatggttctgatgttgaatggagcaaagaagtcaaggggaacatgtat
gatatgattgttgaaggttttcagctattaagcagatggactgcacgcatatgggaacaa
tgtgcttggaaattttctcgaccatgcaaagatgcatccccatcattctctgattatgaa
aaggtagtacgatataattacagtgcagaggaaaggaaagcactggttgaacttgtgagc
tacataaagagtgttggatctatgatgcagcggtgtgatacactggttgctgatgcttta
tgggaaacaatacattctgaggtacaagattttgtccaaaacacattagctactatgttg
cggactaccttcagaaagaagaaggacctctctaggattctttcagatatgcggaccctt
tcagctgattggatggctaatacaaacaagtcagaatctgagttacagtcctctcagcat
ggaggtgaagaaagcaaagcaaacatattttatccaagagcagttgccccaactgctgct
caggtgcactgcttgcagttcttaatatatgaggtggtttctggtggtaaccttaggagg
ccaggtggactcttcggcaatagtggctcagaaatcccagttaatgatttaaaacagctg
gagacatttttttacaagcttggttttttccttcatattttagactactcagcaactgtt
gcaacattgacagatcttggtttcttatggtttagagaattctatttagagtcttcacga
gtcattcagtttccaattgaatgctcccttccttggatgttggtggattgtgtacttgag
tcaccgaattctggtcttctcgagagtgttctaatgccatttgacatctataatgattca
gctcagcaagccttggtgttgctgaagcaacggtttttatacgatgaaattgaggctgag
gtggatcattgttttgatatatttgttacaaaattatgtgaaaccattttcacatattac
aaaagttgggcggcatgtgaattgcttgatccttcattcctctttgcttcggacaatgca
gaaaagtatgccgtgcaacccataaggctcaatatgctgcttaaaatgactagagtgaag
ctgcttggaaggatgattaatttgcgaagtttgatcactgaacggatgaacaaggttttc
cgtgaaaatattgagtttttatttgatcgttttgagtgtcaggatctgtgtgccatagtg
gaattagagaagttgttggatgtcttaaaacattcccatgaactactgtctagagatctt
tctgtagactcttttagtctcatgttgaatgagatgcaagagaacatttcccttgtatca
ttttctagtcgattggcctcacagatttggtctgagatgcatagtgattttttgccaaat
ttcattctctgcaatactactcaacgttttatcagatcatcaagaacggttcctgttcaa
aagccatctgtaccctcttctaagcctagtttctattgtggtactcaagatttgaattct
gcccatcaaagttttgcacgactgcatagtggattctttggaacacctcacatgttttct
attgttcgacttctgggatcccgatcattaccttggcttattagagctcttcttgatcac
atatcaaacaagattactttgcttgaaccaatgattacaggattacaagattctttgcca
aaatcaattgggcttcttcctttcgatggaggtgtgacaggttgtgtgagactcgttaag
gagcatcttaactgggagacaaaatcagaactgaaagctgaggttcttcatggcataaaa
gagattggaagtgtattatattggatggggcttctagatattgtgttgagagaaaaggat
tctatggatttcatgcaaactgctccctggctgggcttgcttcctggagcagatggtcaa
atagtaacttctcaagatggtggagacagccctgttgttagtttgtttaaatcaacagct
gctgcaatggtttcataccctggctgtccatcacctacctctttccacattatgtcaaaa
caagcagaagctgcagatcttttatacaaggctaacttgaacactggaagtgtgctggag
tatgcacttgctttcactagtgctgcgttggataaatattgtaataaatggagtgctgca
cccaaaacaggcttcattgacatcacaatttctaaagatttctatcgaatatacagtggt
ctccaaattggatacttggaagaatctgcccaagtgccatcaaatagtcatgaaaggctg
ggggattcaattgcttgggggggctgcactataatttatttgcttgggcagcagctgcat
tttgagctgtttgacttttcatatcagatcctcaatatcgcagaagtggaggctgcatct
gttatgcaaacacataagaactcacaatttgccgtgcagggatgggaagccttattggaa
gcaatgaaaaaagcaaggagattaaataaccatgtattttctatgcttaaagcacgttgc
ccccttgaagaaaagacagcttgtgctattaagcaaagtggtgctccaatacatcgtata
aaatttgataacacagtttcagcatttgaaacactgccgcagaaaggttcttaa
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