Glycine soja (wild soybean): 114401418
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Entry
114401418 CDS
T06057
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114401418
03036 Chromosome and associated proteins [BR:
gsj03036
]
114401418
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114401418
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
114401418
SLIK complex
114401418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
CHDCT2
Motif
Other DBs
NCBI-GeneID:
114401418
NCBI-ProteinID:
XP_028219738
LinkDB
All DBs
Position
2:complement(48465570..48486039)
Genome browser
AA seq
1766 aa
AA seq
DB search
MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE
PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNGSESGQES
KSGSDYRNADGSEDNSLDGRAGRLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDG
EEQSDSLHYGGIKKPTGSNSWPQRMSTSANRTLHRNLRFSDDVEDNDGEDEDDDDGDNDN
DGDDADYEEEDEADEDDPDDADFEPATSGHAANKDKDWEGEGSDEDDDSDANIVVSDDDE
PFYAKRPKGRQRGKIGQNIKSTRERKVYAASGRQRRVKSSFEDNESTTEDSDSDGDEDFK
STKKRSVHVRKNNGRSSAATGFSSRNSEVRTSSRTVRKVSYVESEESEEADEAKKKKSQK
EEIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDSEIDWNEIEFLIKWKGQ
SHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIKQ
NSQVERIIADRISNDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAA
MAVQGKMVDSQRKKSKASLRKLEKQPEWLKGGELRDYQLEGLNFLVNSWRNDTNVILADE
MGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRAS
REVCQQYEFYNEKKPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQ
LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNLSSFNENE
LANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVR
GNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLVILDKLLV
KLHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDF
CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV
EEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEE
RNDEESKKRLLSMDIDEILERAEKVEEKETDGEQGNELLGAFKVANFCNDEDDGSFWSRW
IKPDAVFQAEEALAPRSARNIKSYAEVDPSERSNKRKKKEPEPPEQVPKRRKAEYSAHAV
PMIEGASVQVRNWSYGNLSKRDALRFSRSVLKYGNESQIDLIAAEVGGAVGAAPPGAQIE
LFNALVDGCTEAVELGNLDAKGPLLDFFGVPVKANDLLTRVQQLQLLAKRIGRYEDPVAQ
FRVLSYLKPSNWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLMKKIAPVELQH
HETFLPRAPNLKDRANALLEQELAVLGVKNANSRVGRKPSKKERENMINLSLLRGQEKKK
KSSSVNVQMRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTL
KRLHRLQQTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEQEPYKQDRMTVRLWKYVST
FSHLSGERLHQIYSKLRQEQDEAEVGPSHTNGSVSVSFSRNGNPFRFHMERQRGLKNMAT
YQMPEPVDNTGKSEAWKRRRRTESDNHFQGQPPPQRTVSNGVRIADPNSLGILGAGPSDK
RFASEKPYRTQPGGFPSRQGFSSGIK
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggctttctttaggaacttttcaaatgatacagtctcacatggtgtcatggaagataaa
agccaaggacagaatgctaatagagttcatagatcagtaggtaatgattgtactgatgca
acttctagtgagaaggaatttgatatgaacatggaggcacagtatgatagtgatggcgaa
ccagatggttccagtagactgcaaactgaggcaacagctgatgatggagatgctgtgaaa
gaatcaaacttgcagactactggtagtaaaacagctatggtcggaaggtggggttcaaca
ttttggaaggactgtgggcaaatggaccctcaaaatggttctgaatctgggcaggaatca
aaaagtggatcagattatagaaatgcagatgggtctgaagataattcattggatggaaga
gcgggaagattagactcagatgatgatgatggacaaaaggaggcaggaaaaggtccaaga
ggtcactctgatgttcctgctgaagagatgttgtctgatgagtattatgagcaggatggg
gaagagcaaagtgactcattgcattatggtgggatcaaaaagcccactggatcgaattca
tggccacaacggatgtcgacctctgcaaatagaactttgcataggaatttgaggttttca
gatgatgttgaagataatgatggtgaggatgaagatgatgatgatggtgataatgataat
gatggtgatgatgctgattatgaagaagaggatgaagcagatgaagatgatcctgatgat
gcagactttgagcccgccacaagtggtcatgctgcaaacaaggataaagattgggaaggt
gaaggctcggatgaagatgatgacagtgacgcaaatatagttgtctccgatgatgatgaa
cctttctatgctaaaagacctaaaggaaggcaacgaggtaagattggacaaaacataaaa
tctaccagagaacgtaaagtgtatgctgcatctggtcgacaaagaagagttaaatcgtct
tttgaggacaacgagtcaacaacggaggattccgacagtgatggtgatgaggatttcaaa
agcacaaaaaagcggagtgttcatgtccgcaagaacaatggtcgctcgtctgcagccaca
ggcttttcttcgcgcaacagtgaggttcgcacttctagtaggacggttaggaaggtatca
tatgttgaaagtgaagagagtgaagaagctgatgaagcgaaaaagaaaaagtcccaaaag
gaagaaattgaagaggacgatggtgactccattgaaaaggtgctctggcatcagccaaag
ggcatggctgaagatgctcaaaggaataatagatcaacagagcctgttttaatgagtcac
ttgtttgattcggaaattgattggaatgagattgaatttttgataaaatggaaagggcag
tcacatttgcactgtcagtggaagtcttttgctgagcttcaaaatctcagtggttttaag
aaggttttgaattatacaaagaaaataatggaagacatcaggtacaggaggacaatctca
agagaggagattgaggtcaatgatgttagtaaggagatggatttagatattatcaaacag
aacagtcaggtggaaagaataattgcagataggatcagcaacgataattctggcaatgtt
attccagaatacttggtcaagtggcaaggactatcttatgctgaagcgacctgggaaaag
gacattgatattgcttttgctcaacatgctattgatgagtacaaggctcgtgaggctgct
atggcagttcaaggaaagatggtagattctcagcgtaagaagagcaaagcaagtttgcgg
aagcttgagaaacaacctgaatggttgaagggtggagagctccgtgattatcaacttgag
ggtctgaattttcttgttaacagttggagaaatgatacaaatgtcattttagctgatgaa
atgggccttggaaaaactgttcagtcagtatcgatgcttggttttctacagaatgcccag
caaatccatggtccttttcttgtagttgttccattgtccactttatcaaattgggccaaa
gaattcaggaagtggcttcctgatatgaatattatcatatatgtaggtactcgtgcaagt
cgagaggtttgtcaacaatatgaattttataatgagaaaaaacctgggaagccaataaaa
ttcaatgcactgttgactacatatgaagtagttttgaaggataaggctgttctctccaag
atcaaatggaattatctgatggtggatgaggctcataggctaaaaaatagtgaggcacaa
ttgtatacgacactttcagaatttagcaccaagaacaaattgcttatcactggcactcct
ctacagaacagtgtggaagaactatgggctttgcttcatttccttgatccggacaagttc
aggagcaaggatgaatttgttcagaactataagaatctgagttcttttaatgagaatgag
cttgcaaatctgcatatggaattgagacctcacatacttcgaagagttatcaaagatgtg
gagaaatcattaccccccaaaattgaacgtatccttagggttgaaatgtctcctcttcag
aaacagtattataagtggattttggaacgtaattttcacaatttgaacaaaggagttcgt
gggaatcaggtttctcttttaaatattgtggtggaattaaagaagtgctgcaaccatccc
ttcttgtttgaaagtgctgaccatggctatggtggggactcaggaagtagtgacaacagt
aaactagagagaattgtttttagcagtggcaagcttgtcatacttgataagctgcttgtt
aaattgcatgaaaccaagcatcgtgttctgattttctctcagatggttaggatgttagat
atactgggagagtatatgtcacttcgagggtttcaatttcagaggcttgatggcagtaca
aaagctgagcttcgacaacaagcaatggatcatttcaatgcacctggtagtgatgatttt
tgcttccttctttcaacacgggcaggaggtctgggtatcaatcttgctacagcagacact
gttataatatttgattctgattggaatcctcaaaatgacctgcaggcaatgagtagagct
catagaattggacaacaagaagttgttaacatttatagatttgtgacaagcaaaagtgtt
gaggaagatattttggaacgtgctaagaagaaaatggttctggaccacttggtgattcaa
aagctaaatgcagagggtaggctggagaagaaagaagccaaaaaaggaggaagttatttt
gacaaaaatgagctgtctgcaatcttacgattcggagcagaggagctttttaaagaagaa
agaaatgatgaagaaagcaagaaacgactgttaagtatggatatagatgagattcttgaa
agagcagagaaggttgaagagaaggaaactgacggggaacaaggaaatgagttattaggt
gcttttaaggttgccaatttttgcaatgatgaagatgatggaagtttctggagccgttgg
ataaagcctgatgctgtatttcaagcagaggaagctcttgctcctcgatcggctagaaat
attaaaagctatgcagaggttgatccatctgaaagaagtaataaaagaaaaaagaaggaa
cctgaaccacctgagcaagttccaaaacgccggaaagcagagtattctgctcatgcagta
ccaatgattgagggagcatctgtccaagtgagaaattggtcatatgggaatttatctaaa
agagacgcacttcgtttttctcgttcagttttgaaatatggcaatgagagccaaatcgac
ttaattgctgctgaggttggtggtgctgttggggcagctccacctggagcacagattgaa
cttttcaatgctcttgttgatggttgtacagaagcagtagaacttggaaatctagatgca
aaggggcctttgctggatttttttggtgtaccagtgaaggcaaatgatctacttacccgt
gtccaacaacttcagcttttggcaaagcgcattggtcgatatgaagatcctgtcgcacaa
tttcgcgttctgtcatatctcaaaccatcgaactggtccaaaggttgtggatggaatcaa
attgatgatgctagattacttcttggaatacattaccatgggtttggtaattgggaaaag
attagattggatgaaagacttggccttatgaaaaaaattgctcctgtagaacttcaacac
catgaaactttcttgccacgagctccaaatttgaaagaccgtgctaatgcccttttggag
caagaacttgctgttcttggtgtgaaaaatgccaacagcagagttggacggaagccttcc
aagaaagagagagaaaatatgattaatttatcactgttacgtgggcaggagaaaaagaaa
aaatcgagttctgttaatgtccaaatgagaaaggatagatttcagaaaccccagaaggtt
gaatctatagtaaaggaagagggtgaaatgtctgacaatgaggaagtatatgagcagttt
aaggaggtaaaatggatggaatggtgtcaagatgtgatggttgaagaaatgaaaactttg
aaacgtcttcacaggttgcagcaaactagtgccaatcttccaaaggaaaaggtgctttcg
aaaatacgcaactatttacaacttcttgggagaaggatagatcaaattgtgttagaacat
gaacaggaaccctataagcaagatagaatgaccgtgcgactgtggaaatatgtctccact
ttttcccatctttcaggggagaggcttcatcaaatatattccaaacttagacaggagcaa
gatgaggcagaggttggcccctctcacacaaatggatcggtatctgtttcatttagcaga
aatggaaatccattccgtttccatatggagaggcaaagaggattaaaaaatatggctacc
tatcaaatgccagaaccagttgataatactgggaaatccgaggcatggaaacgaagaaga
agaactgaaagtgacaatcacttccagggtcagccaccacctcaaaggaccgttagtaat
ggagtccggattgctgatcctaactcactcgggatcctaggtgctgggccgtcggacaaa
cgctttgctagtgagaaaccttataggacacaacctggtggttttccttcaagacaaggc
ttctcttcaggtataaagtaa
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