Glycine soja (wild soybean): 114403050
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Entry
114403050 CDS
T06057
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114403050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114403050
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114403050
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
114403050
NCBI-ProteinID:
XP_028221562
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Position
20:complement(50351194..50355539)
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AA seq
801 aa
AA seq
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MDDIEKPEKRSRDRHSERHRDSDEHRHHRSDRNHKRDHKSRDTEGSKDKDRAYERESSRS
KVKRDEEREYSHSHKRKEREHSEDMDFLDNKIRVSDERRERRKFGDKVKKEEDDAEEEDG
GDNVRAVHEAKVKEEVTNFKDTASLQNGALGSPASVPPETSLTPPSSIPIKVSSNFTTNE
NKGLSITRSHEVAGKSSTDGPSSTAGKTGSFSIDALAKAKKALQMQKELSEKLKKIPQLN
KSSTQTLQGSSNLGSKTESTMPSSNAGVALITSTSASMGHVANMSISASTASANPPATAT
SATGTATLPNFEAVRRAQELAARLGFRPDPQFAPLINTFPGQNQMVTDVAIPQKPTKAPV
LRLDAQGREIDEHGNVVNVTKPSNLSTLKVNINKQKKDAFEILKPVLDVDPESNPHFDAT
MGINKTKLLRPKRMNFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAAPD
INPNLIEITERVVIKEKPKDQIPEIEWWDVPLLHSGNYGDIDNGTIGEDKLKMEKITFYV
EHPRPIEPPAEPAPPPPQPLKLTKQEQKKLRTQRRIAKEKERQEMIRQGVIEPPKPKVKI
SNLMKVLGTEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPN
TVETLVSLYKINDLSHPKARFRVDVNAQENRLTGCAVICDGISVVVVEGGNKSIKRYGKL
MLRRINWTDVSKETEENEDSDDDKPINKCVLVWQGSVAKPSFNRFSVHDCITEAAGRKVF
VDAGVPHYWDLAVNYVEDEAV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatagaaaaacccgagaagagaagcagagatcgtcactcggaacgccatcgc
gactccgatgagcaccgccaccatcgatctgacaggaatcacaagcgcgaccacaaatcc
agggacaccgaaggaagcaaggataaggatagggcttacgaaagagaaagtagcaggtcg
aaggtgaaacgcgatgaggagagggaatattcgcattctcacaagcggaaggagagggag
cacagcgaggacatggacttcctggataataaaattagggtttctgacgagaggagggaa
cgaaggaagtttggggataaagtaaaaaaggaggaagatgatgcagaagaagaagacggt
ggtgataatgttagagccgttcacgaggccaaggttaaggaggaagttaccaatttcaaa
gacactgcgtctctccaaaacggtgcattgggatcacctgccagtgtgccgcccgagaca
tctttgacccctccttcttccattcctatcaaggtatcttcgaattttaccacaaatgaa
aataagggtcttagtattaccaggtctcatgaggttgctggaaaatctagtacagatgga
ccttcttcaactgctggaaaaactggaagcttctctattgatgcccttgctaaggctaag
aaagctttacaaatgcagaaagagttgtcagaaaagctcaagaaaattcctcagttgaat
aagagttctacccaaactttgcaaggaagctcaaacttgggttcaaagactgaatctaca
atgccctcttccaatgctggagtggcattaataacttccacctcagcttctatgggccat
gttgcaaatatgtcaatttccgcctcaactgcttctgcaaatcctccagctactgccact
agtgctactggtactgcaactctaccaaactttgaagctgtcaggcgtgctcaagagctt
gctgccaggctgggatttcgcccggatccacaatttgctcctctaattaatacgtttcct
ggtcagaatcagatggtaacagatgttgctatcccacagaaacccaccaaggcccctgtt
cttcgtcttgatgctcagggacgggaaatagatgaacatggaaatgttgttaatgtgact
aaacccagcaaccttagtacattaaaggtcaacattaacaaacagaagaaagatgcattt
gaaatactaaaacctgtattggatgtcgatcctgaatctaatcctcattttgatgcaaca
atgggtatcaacaaaactaagctcctgcgacccaagaggatgaatttccagtttgtggag
gaaggaaaatggtcaagagatgctgaaacaatcaaattgaagagtaaatttggagaagct
caagcaaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgctcctgat
ataaatccaaacctaatagaaataacagagagagttgtaatcaaagaaaaacccaaggac
caaattccagaaattgaatggtgggatgtgcctcttctgcattctggaaattatggtgat
attgataatggaaccataggtgaagataaactgaaaatggaaaagatcactttttatgtg
gagcatcctcgtccaattgaaccacctgctgagcctgcccctccaccacctcaaccattg
aagctaactaagcaagaacagaagaaactccgaacacaaagacgtatagccaaggagaaa
gagcgacaggagatgataagacagggtgtaatagaaccaccaaaaccaaaggtcaagatt
agcaacttaatgaaagtacttggcactgaagcaactcaagatcctactcggcttgaaaag
gaaatacgtagtgcagctgctgagcgtgaacaggctcacatagataggaatattgcacgc
aaacttactcctgctgagctgcgggagaagaaggaaagaaagctgtttgatgacccaaat
acagtggagacacttgtctctctttacaagataaatgatctctcacatccaaaggcccgc
tttagagttgatgttaatgctcaagagaaccggttaactggatgtgcagtgatttgtgat
ggcattagtgttgttgtggtggaaggtggaaacaagtcaattaagaggtatgggaaactt
atgctcagacgtattaattggactgacgtttcaaaagagacagaagaaaatgaagattca
gatgatgataagcctatcaataagtgtgttctggtgtggcaaggaagtgttgccaaacca
agcttcaataggttcagtgttcatgactgcatcaccgaagcagctggccgtaaagttttt
gtggatgctggtgttcctcattattgggacctagctgtgaactacgtagaagatgaagct
gtttga
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