Glycine soja (wild soybean): 114403117
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Entry
114403117 CDS
T06057
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114403117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114403117
Spliceosome [BR:
gsj03041
]
Common components
Common spliceosomal components
SR proteins
114403117
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
114403117
NCBI-ProteinID:
XP_028221676
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All DBs
Position
20:42489198..42493366
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AA seq
376 aa
AA seq
DB search
MQQGKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRAL
DRVEFGRKGRRLRVEWTKHERGVRKPASSRRSSANGRPSKTLFVINFDTYHTRTRDLERH
FEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGY
SPERGRDRHRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRDRSRSRSP
PRRERASPAYGRRSLSPHRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSPEGRGKKS
PQNGHGSSRSPHDTGKTSPENGLGSGSPDEKGNPSPYNGYGGSPNNMPDPRDSPNYGGPE
SPMHERYRSQSPPAEE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagggaaaatgaggcctattttctgtggaaattttgaatatgatgcccggcag
tcagagctggagcggctttttagacgatatgggaaggttgatagggtggatatgaagtct
ggttttgcttttatctatatggaagacgagagagatgctgaggctgctattcgtgctctt
gatcgagtagaatttggtcggaagggacgcagactccgtgtggaatggacaaagcatgaa
cgtggtgttagaaagcctgctagttcaagaagatcttcagctaatgggaggccatcaaag
accttgtttgtaattaattttgatacataccataccagaacaagggacttggagaggcac
tttgaaccatatggaaagatagttagtgtgaggatcagaaggaattttgcttttgttcaa
tatgaatcagaggatgatgctagcagagcactggaagctacaaatatgagcaagttactg
gatcgagttatttctgttgaatttgctgttaaagatgatgatgataggagaaatggatat
agccctgagagaggccgtgatcgtcaccgtgatagaagccgtgatggaaggcgatctcct
agtccttatcgtagagaaaggggtagtcctgattatggccgtgggcccagtccatatcag
agagagaggggcagccctgactatggccgtgaccgtgaccgtagccgtagcagaagcccc
cctaggagggagagagctagccctgcttatgggcgtagaagccttagtccacatagaaga
gaaagggagggttctgaacctgttcgtgactccagccgcagtccttatcacaaagagcga
gggagaactgaccatggtatttctccttctcagagtccagaaggaagagggaagaaaagc
ccccaaaatggtcatggttctagccgtagtcctcatgatactgggaagactagccctgaa
aatggacttggctccggaagtcctgatgaaaaagggaatcccagcccttacaatggttat
ggagggagcccaaataatatgcctgatcccagggacagtcccaattatggcggtcctgaa
agtcccatgcatgaaagataccgcagccagtcaccccctgcagaagaatga
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