Glycine soja (wild soybean): 114403148
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Entry
114403148 CDS
T06057
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114403148
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114403148
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
SRTM1
Motif
Other DBs
NCBI-GeneID:
114403148
NCBI-ProteinID:
XP_028221731
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Position
20:38452641..38457249
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AA seq
502 aa
AA seq
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MLHITCILLMCLLSSFSPPINALLNLTLPHQHPHPESVVHDLQRKVNASLWRREMLSKED
QQEGMSSSSCLTGNPIDDCWRCDPNWAADRQKLAECGLGFGKYAMGGKGGQIYIVTDSSD
RDPANPVPGTLRHAVIQDEPLWIVFAADMTINLKHELIFNSYKTLDGRGANVHVTGHGCI
TLQYVSNIIIHNIHVHHCTPSGNTNIRASPTHVGWRGKSDGDGISIFGSRKIWIDHCSLS
YCTDGLIDAIMGSTGITISNSHFAHHDEVMLLGHDDKYLPDRGMQVTIAFNHFGEGLVQR
MPRCRLGYIHVVNNDFTQWKMYAIGGSANPTINSQGNRYTAPADPDAKEVTKRVDTDDRE
WSGWNWRTEGDIMVNGAFFVPSGAGQSAQYAEATSVQAKSAVQIDQLTMYSGVFGDPRDN
GDLYPGFNGGGTVTGATSKGNTEGSSSDDGDFFGMIFRGSSSSQAAPPSPSSSIVFVSTF
LSLLIIFILDTTTNHAILLSLL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctccacatcacctgcattcttttaatgtgccttctaagttccttctcacccccaatc
aacgctcttctcaacctcactttaccccaccaacaccctcaccccgaatccgtcgtccac
gatctccaacggaaggtgaatgcctcactatggagaagggaaatgctgtcaaaggaggac
caacaagaaggcatgtcgtcgtcgtcgtgtctgaccggaaaccccatcgacgactgctgg
cggtgcgatccgaactgggcggcggaccggcagaagctggcggagtgcggcctagggttc
ggcaaatacgcgatgggcggcaaaggcgggcagatctacatcgtgacggactcctccgac
cgcgacccggccaaccccgttcccggcaccctccgccacgccgtcatccaggacgagcct
ctctggatcgtcttcgccgccgacatgaccataaacctaaaacacgagctcatcttcaac
agctacaaaaccctggacggccgcggcgccaacgtccacgtcaccggccacggctgcatc
acgctccagtacgtctcgaacatcatcatccacaacatccacgtccaccactgcactccc
tccgggaacaccaacatacgggccagtccaacgcacgtagggtggaggggcaaatcggac
ggtgacgggatttcgatcttcggctcacggaagatctggatcgaccattgctcgctgtcg
tactgcacggacggtttgatcgatgctattatggggtccactgggattactatttcgaat
agccactttgcgcaccacgatgaggtgatgcttctgggacacgacgataagtatttgcca
gataggggcatgcaggttacaatcgcgtttaatcacttcggtgagggtctggtgcagcgt
atgccacgatgcaggctcggttacatccacgtcgttaataatgacttcacgcagtggaag
atgtatgctatcggcggtagcgctaaccccaccatcaacagccagggtaaccgttacacc
gctcccgcagaccctgatgccaaagaggtgacgaagcgcgtggacacagacgatagagag
tggagtggttggaattggaggacggaaggggacataatggtaaatggagcgttctttgta
ccctcaggggcggggcagagtgcacagtacgcagaggccaccagtgtgcaagccaaatcc
gctgttcaaattgaccagctcactatgtactccggtgtcttcggtgatcccagggataat
ggagatttatatcccggtttcaacggcggtgggaccgtgaccggagccaccagcaaaggc
aacacagaggggtccagcagtgacgatggggacttctttgggatgatattcagaggcagc
agcagcagccaagcagcgccaccatcaccttcttcgtccattgtatttgtttcaaccttt
ttgtctcttttaattatttttattttggacactaccaccaaccatgccattctattatca
ttactatga
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