Glycine soja (wild soybean): 114403248
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Entry
114403248 CDS
T06057
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114403248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114403248
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114403248
mRNA cycle factors
Common to processing body (P body) and stress granule
114403248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
114403248
NCBI-ProteinID:
XP_028221877
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All DBs
Position
20:complement(7122482..7129076)
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AA seq
967 aa
AA seq
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MIVEMDKMSAPSSRERAQRLYDKNLELESKRRRSAKARVPSDPNAWQQIRENYEAIILED
HAFSEQHNIEYALWQLHYKRIEEFRAYFSAALSSTNANSSQGGKGPARPDRITKIRLQFK
TFLSEATGFYHDLITKIRAKYGLPLGYFEDSEKDGKKSAEMKKGLVACHRCLIYLGDLAR
YKGMYGEGDSINREFTAASSYYLQAASLWPSSGNPHHQLALLASYSGDELVAIYRYFRSL
AVDSPFTTARENLIVAFEKNRQSFSQLSGDVKALAVKESSVRSTGKGRGKGEAKLATRGT
GVDASPRTGASSIQETYKYFCTRFVRLNGILFTRTSIETFAEVLAVVSTGLRELLSSGQD
EELNFGTDTPENALVIVRIVCILVFTVYNVNKESEGQTYSEIVQRAVLLQNAFTAAFELM
GYLIERCAQLRDPSSSYLLPGILVFVEWLAFYPDLAAGNDVDENQANLRSEFWNRCVSFL
NKLLSVGPMSIDDDEEETCFNNMSRYEEGETENRHALWEDSELRGFIPLLPAQTILDFSR
KHSIVSDGDKERKARIKRILAAGKALANVVKVDKQMIYFDSKVKKFVIGVEPQTADDFGF
STYSGMSNAKELVQENPAQKSKMEIVQSNQHQHTEGDDDDEVIVFKPVVAETRADVIASS
WAPHVGLEPFPKASGGDLIFHVNSTSNPLSNLSHQTLSVPGGGMVPQHLQPVQPHTSRWL
EEEISLANNLKGLGLFENGHVMKPGLQEAVGFSNHVSLPFPIQQSIGADTNGMFYGFSKA
LESAVPSKVDTIASSGVVTDNLAVKTSALPVGSRKAPVSRPTRHLGPPPGFSHVPPKQGI
ESTVSDSISGNPIMDDYSWLDGYHLHSSTKGLGSNGPLNYSQSNSQQVSNNGLSPTASFP
FPGKQVPPVPLQVEKQNGWQDYQTYDLLKSHHGQQLQPQQLTTGNQQFSPLPEQFQGQSM
WTGRYFV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagaaatggataaaatgtctgctccttcatcaagggagcgtgcacaacgcctc
tatgataagaaccttgaattggagagtaagcgtcggaggtcggctaaggcgcgtgtccca
tcagatcctaatgcttggcaacagatacgtgagaattatgaagcaataattcttgaggat
catgctttctctgagcagcacaatattgaatatgctctttggcagttgcattataagcgg
attgaggagtttagggcatacttcagtgctgctctttcttctacaaatgcaaactcatct
cagggagggaaaggtcccgcgcgacctgatcggattactaaaataaggctacaatttaag
actttcctttcagaagcaactggattttaccatgatcttattacgaaaatcagagctaag
tatggtcttcctcttggttactttgaggattcagagaaagatggaaagaaatctgctgag
atgaagaaaggtttagtagcttgtcatcgttgtctgatatacttgggtgatcttgctcgt
tataaaggaatgtatggtgaaggcgactcaattaaccgggagttcaccgcagcttctagt
tattacttgcaagctgcatcactttggccttctagtgggaacccccatcatcagcttgct
ttgttggcttcatattctggggatgagctggtggctatttatcgatattttcgtagtctg
gcagtagatagtccatttacaactgccagagaaaacttgatagttgcatttgagaagaat
cgtcaaagtttttctcagctttctggtgatgttaaagctcttgcagtcaaggaatcttct
gtgcgatcaactggcaaaggaagaggaaaaggggaagcaaaacttgcaacaaggggtact
ggtgttgatgccagtcctagaacaggagcatccagtatacaggaaacatataaatacttc
tgcacgcgctttgtccgtctaaatggaatcttgtttacacgcacaagcattgagactttt
gctgaagttcttgctgttgtaagcactggcctgcgtgagcttctgtcttccggtcaagat
gaagagctgaattttgggacagacactcctgagaatgcacttgtcatcgtcagaattgtc
tgcattctagtattcacagtttataatgtgaacaaggaatctgaaggtcaaacttattca
gaaattgtacagcgtgctgttctgcttcagaatgcatttacagcagcttttgaattgatg
ggttacctaatagagagatgtgcacagctgcgtgatccttcttctagttatcttttgcca
ggcattttggtttttgttgagtggttggctttttatccagatcttgctgcaggcaatgat
gtggatgaaaatcaggcaaatttgagatcagaattttggaatcgttgtgtatccttcttg
aataagctgctttcagttgggcctatgtctattgatgatgacgaagaggagacttgcttt
aataacatgagcaggtatgaggaaggggaaactgaaaaccgacatgctttgtgggaggac
tccgagttaaggggatttattccacttcttcctgcacaaaccatcctggatttttcaagg
aagcattccattgtaagtgatggtgataaggaaagaaaagctcggatcaaaaggatttta
gctgctgggaaggctttagcaaatgttgttaaggttgataaacaaatgatctattttgat
tcaaaggtgaagaaatttgtaattggtgttgagcctcaaactgcagatgattttggtttt
tccacctattcaggcatgtcgaatgcaaaagagttagtgcaagaaaatcctgcacagaaa
tcgaagatggaaattgttcagtcaaaccaacaccagcatacggaaggagatgatgacgat
gaggttattgttttcaaacctgtagtggctgagacacgagctgatgtgattgcctcatca
tgggcaccccatgtgggtttggaaccttttccaaaagcatctggaggggatttaatattt
catgttaattctacttctaatcctctaagtaacctaagtcatcaaactttatctgttcct
ggtggtggtatggtgcctcaacacctgcaaccagttcagccacatacatcaaggtggtta
gaggaggaaatttctcttgctaacaatttaaaaggtcttgggttatttgagaatggacat
gtgatgaaacctggtctacaagaagcggttggcttctccaaccatgtttcacttcctttt
cctatccaacaatctataggtgctgatactaatggcatgttttatggtttctcaaaagct
ttggagtctgcagtaccatccaaagttgataccattgcatcttctggagtagttactgat
aatttagctgtaaaaacgtcagctttgccagttggttcaagaaaagccccagtcagtcga
cctactaggcaccttggacctcctcctggtttcagtcatgttcctcccaaacaaggtatt
gaatccaccgtttcagattcaattagtgggaacccaattatggatgattatagttggttg
gatggatatcatttgcattcatcaacaaaaggattaggctccaatggtcctcttaactac
tctcagtcaaattctcagcaagtcagtaacaacggcttgagtcctactgccagctttccc
tttcctggaaaacaagttcctcctgtgcctcttcaagtggagaaacagaatggttggcaa
gattatcaaacttatgatcttttaaaatcacatcatggtcagcagcttcagccacaacag
ctcacaactggaaatcagcagttttctcctctgcccgagcaatttcaaggacagtcaatg
tggacaggtcgttactttgtgtga
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