Glycine soja (wild soybean): 114403377
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Entry
114403377 CDS
T06057
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00040
Pentose and glucuronate interconversions
gsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114403377
Enzymes [BR:
gsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114403377
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
114403377
NCBI-ProteinID:
XP_028222107
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Position
20:31159173..31165011
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AA seq
448 aa
AA seq
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MAVSSSSATKWVVFLLLALLIREEAMATPQISDLRNLEVERHRLPSLTNSSMAERAKEAE
KLNEQAAVANPEEVVSMVEMSIQNSTERRKLGFFSCGTGNPIDDCWRCDPNWQRNRKRLA
DCGIGFGRNAIGGRDGKFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLK
QELIMNSFKTIDGRGVNVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPTHFG
WRTMADGDAISIFGSSHIWVDHNSLSHCADGLVDAVLGSTAITISNNHFTHHNEVILLGH
SDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYNAPTNRFAKEVTKRVETAESQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARAS
SLGAKSSSMVGSMTSNAGALGCKRGSQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcttcttcttctgcaacaaaatgggtcgtcttcttgcttctggcgctgctt
attcgagaagaagctatggctacaccacagatctctgacctcaggaatcttgaagttgaa
agacacaggttgccgagcttgacgaactcgtcaatggcggagagggcaaaagaggctgag
aaattaaatgaacaagctgcagtggctaacccagaggaagtggtttcaatggttgagatg
agcatccaaaacagcacagagaggaggaagttgggatttttctcttgtggaactggcaac
cccattgatgattgctggcgttgcgaccccaactggcaacgcaaccggaagcgtcttgca
gattgtggcattggttttggccgaaacgccatcggtggccgtgatggaaaattctatgtg
gtgactgaccccagggatgatgaccccgtgaacccgaaacccggcactcttcgccatgct
gtgatccaggataagccattgtggattgtgttcaagagggacatggttattcagctgaaa
caagagctgatcatgaacagcttcaagacaattgatggtagaggagtcaatgtgcacatt
gctaatggagcatgcatcacaattcagtttgttaccaatgtcatcatccatggcttgcac
attcatgattgcaaacctactggaaatgctatggtgagaagctccccaacccactttggt
tggaggacaatggctgatggagatgccatctccatatttggctcaagccacatttgggtt
gaccacaactccttgtcacactgtgctgatggccttgtggatgctgtcctaggctcaaca
gccataactatttccaacaaccacttcacccaccacaatgaggtgattctgctgggccac
agtgactcttacacaagagacaagcagatgcaagtgaccatcgcatacaaccattttgga
gagggacttatccagagaatgccacgttgtagacatggatatttccacgtggtgaacaat
gactacactcactgggagatgtatgctattggtggaagtgctaatcccaccatcaacagc
cagggcaacagatacaatgctcctactaaccgttttgccaaggaggtgacaaagagagtg
gaaacagcagaaagtcagtggaagggttggaattggaggtcagagggagatttgttgctg
aatggcgcctatttcacaccatctggtgctggagcctcagcaagctatgcaagagcctct
agcttaggagcaaaatcttcttccatggttggttccatgacttccaatgctggtgcacta
ggttgcaaaagaggcagtcagtgctag
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